RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 YWHAHQ04917 246 aaPredicted RBP20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 ANGPT1Q15389 498 aa20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 SPATA1Q5VX52 437 aa20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 JADE1Q6IE81 842 aa20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 RNF19BQ6ZMZ0 732 aa20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 SFR1Q86XK3 245 aa20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 TCEAL4Q96EI5 215 aa20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 MCRS1Q96EZ8 462 aa20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 TSPAN18Q96SJ8 248 aa20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 FANCMQ8IYD8 2048 aa20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 CACNA1IQ9P0X4 2223 aa20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 PTPRZ1P23471 2315 aaPredicted RBP20.42■□□□□ 0.86
CCDC88B-206ENST00000473405 PPP1R37O75864 691 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 CPB1P15086 417 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 FCARP24071 287 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 ABCD1P33897 745 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 STARD6P59095 220 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 DYMQ7RTS9 669 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 ASCL5Q7RTU5 278 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 FRMD5Q7Z6J6 570 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 KRI1Q8N9T8 703 aaKnown RBP20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 INTS4Q96HW7 963 aaKnown RBP20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 BACH2Q9BYV9 841 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 FOXQ1Q9C009 403 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 CEP72Q9P209 647 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 MAFFQ9ULX9 164 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 MTMR6Q9Y217 621 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 STYXL1Q9Y6J8 313 aa20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 EP300Q09472 2414 aaPredicted RBP20.41■□□□□ 0.86
CCDC88B-206ENST00000473405 PRR23AA6NEV1 266 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 MYMKA6NI61 221 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 SPTLC1O15269 473 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 XPOTO43592 962 aaKnown RBP20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 ECI2O75521 394 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 DCNP07585 359 aaKnown RBP20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 OR4Q2P0C623 313 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 ACOT2P49753 483 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 LILRA4P59901 499 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 CEBPZQ03701 1054 aaKnown RBP20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 ZNF720Q7Z2F6 126 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 TICRRQ7Z2Z1 1910 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 CD302Q8IX05 232 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 PJA1Q8NG27 643 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 DNAJC19Q96DA6 116 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 DDX23Q9BUQ8 820 aaKnown RBP20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 STRA6Q9BX79 667 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 PLA2G2FQ9BZM2 168 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 CRISPLD1Q9H336 500 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 SIT1Q9Y3P8 196 aa20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 MORC2Q9Y6X9 1032 aaPredicted RBP20.4■□□□□ 0.86
CCDC88B-206ENST00000473405 DNAH14Q0VDD8 3507 aa20.39■□□□□ 0.86
CCDC88B-206ENST00000473405 GLULP15104 373 aa20.39■□□□□ 0.85
CCDC88B-206ENST00000473405 TWF1Q12792 350 aa20.39■□□□□ 0.85
CCDC88B-206ENST00000473405 SNW1Q13573 536 aaKnown RBP20.39■□□□□ 0.85
CCDC88B-206ENST00000473405 TMEM132DQ14C87 1099 aa20.39■□□□□ 0.85
CCDC88B-206ENST00000473405 C9orf57Q5W0N0 161 aa20.39■□□□□ 0.85
CCDC88B-206ENST00000473405 FAM212AQ96EL1 285 aa20.39■□□□□ 0.85
CCDC88B-206ENST00000473405 USP28Q96RU2 1077 aa20.39■□□□□ 0.85
CCDC88B-206ENST00000473405 CCDC39Q9UFE4 941 aa20.39■□□□□ 0.85
CCDC88B-206ENST00000473405 DERAQ9Y315 318 aa20.39■□□□□ 0.85
CCDC88B-206ENST00000473405 YIPF1Q9Y548 306 aa20.39■□□□□ 0.85
CCDC88B-206ENST00000473405 A0A087X0B3 334 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 ANO9A1A5B4 782 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 LRRN2O75325 713 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 MOSPD3O75425 235 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 MICAL2O94851 1124 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 TYMPP19971 482 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 ADSSP30520 456 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 EPHA5P54756 1037 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 KCNA1Q09470 495 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 MLF2Q15773 248 aaPredicted RBP20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 RRAGBQ5VZM2 374 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 ADALQ6DHV7 355 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 TANGO2Q6ICL3 276 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 OVOS1Q6IE37 1185 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 CRELD2Q6UXH1 353 aaPredicted RBP20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 DSTYKQ6XUX3 929 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 PDZD4Q76G19 769 aaPredicted RBP20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 HS6ST3Q8IZP7 471 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 HVCN1Q96D96 273 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 PGLYRP2Q96PD5 576 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 OXCT2Q9BYC2 517 aaPredicted RBP20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 FOXD4L1Q9NU39 408 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 SEL1LQ9UBV2 794 aa20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 AGO2Q9UKV8 859 aaKnown RBP20.38■□□□□ 0.85
CCDC88B-206ENST00000473405 NUP210Q8TEM1 1887 aaPredicted RBP20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 OR6C75A6NL08 312 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 PIRO00625 290 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 ZNF197O14709 1029 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 TXLNAP40222 546 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 PFKPQ01813 784 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 SLC39A14Q15043 492 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 SLC44A4Q53GD3 710 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 FAM78AQ5JUQ0 283 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 SLFN12LQ6IEE8 588 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 USP37Q86T82 979 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 ELMOD1Q8N336 334 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 ELSPBP1Q96BH3 223 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 SHDQ96IW2 340 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 SENP8Q96LD8 212 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms