RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ASB7Q9H672 318 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 ASAH2Q9NR71 780 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 STYXL1Q9Y6J8 313 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 CITO14578 2027 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 TRAK2O60296 914 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 CEBPBP17676 345 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 PSMC3P17980 439 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 WEE1P30291 646 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 ZRSR1Q15695 479 aaKnown RBP14.72□□□□□ -0.05
CHD3-209ENST00000473376 FAM78AQ5JUQ0 283 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 SPECC1Q5M775 1068 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 TANGO2Q6ICL3 276 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 SLFN12LQ6IEE8 588 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 USP37Q86T82 979 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 GPR161Q8N6U8 529 aaKnown RBP14.72□□□□□ -0.05
CHD3-209ENST00000473376 ZBTB44Q8NCP5 570 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 RUBCNQ92622 972 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 REEP2Q9BRK0 252 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 HAPLN2Q9GZV7 340 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 RPF1Q9H9Y2 349 aaKnown RBP14.72□□□□□ -0.05
CHD3-209ENST00000473376 TUBGCP4Q9UGJ1 667 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 ZMYM5Q9UJ78 669 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 CPSF3Q9UKF6 684 aaKnown RBP14.72□□□□□ -0.05
CHD3-209ENST00000473376 DSEQ9UL01 958 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 SMC3Q9UQE7 1217 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 C2CD2Q9Y426 696 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 ZNF292O60281 2723 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 TRIP11Q15643 1979 aa14.72□□□□□ -0.05
CHD3-209ENST00000473376 DOCK6Q96HP0 2047 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 LACTBL1A8MY62 500 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 KINO60870 393 aaKnown RBP14.71□□□□□ -0.05
CHD3-209ENST00000473376 FAM13AO94988 1023 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 CYP11A1P05108 521 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 HARSP12081 509 aaKnown RBP14.71□□□□□ -0.05
CHD3-209ENST00000473376 CPB1P15086 417 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 DDIT3P35638 169 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 MATR3P43243 847 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHD3-209ENST00000473376 ID4P47928 161 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 ARPP19P56211 112 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 LILRA4P59901 499 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 RAD51AP2Q09MP3 1159 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 TWF1Q12792 350 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 PPP2R5DQ14738 602 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 UBXN2BQ14CS0 331 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 ENOX2Q16206 610 aaKnown RBP14.71□□□□□ -0.05
CHD3-209ENST00000473376 LARP1BQ659C4 914 aaKnown RBP14.71□□□□□ -0.05
CHD3-209ENST00000473376 TPRG1Q6ZUI0 275 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 GPBP1Q86WP2 473 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 NT5DC4Q86YG4 428 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 MFSD6LQ8IWD5 586 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 ZNF687Q8N1G0 1237 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 MYCT1Q8N699 235 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 SUMF1Q8NBK3 374 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 KCNG4Q8TDN1 519 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 ING5Q8WYH8 240 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 HVCN1Q96D96 273 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 PLA2G2FQ9BZM2 168 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 BRD9Q9H8M2 597 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 PRMT8Q9NR22 394 aaPredicted RBP14.71□□□□□ -0.05
CHD3-209ENST00000473376 BLOC1S4Q9NUP1 217 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 SPATA6Q9NWH7 488 aaPredicted RBP14.71□□□□□ -0.05
CHD3-209ENST00000473376 ZSCAN32Q9NX65 697 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 CEP72Q9P209 647 aa14.71□□□□□ -0.05
CHD3-209ENST00000473376 MORC2Q9Y6X9 1032 aaPredicted RBP14.71□□□□□ -0.05
CHD3-209ENST00000473376 MYH15Q9Y2K3 1946 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 DMDP11532 3685 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 SPTBN4Q9H254 2564 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 ANO9A1A5B4 782 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 SHISA7A6NL88 538 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 PIRO00625 290 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 LILRB5O75023 590 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 MOSPD3O75425 235 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 CENPBP07199 599 aaPredicted RBP14.7□□□□□ -0.06
CHD3-209ENST00000473376 PDCP20941 246 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 CCR2P41597 374 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 EPHB3P54753 998 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 NRLP54845 237 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 FZD5Q13467 585 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 POSTNQ15063 836 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 OVOS1Q6IE37 1185 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 CENPPQ6IPU0 288 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 POTEHQ6S545 545 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 RNF19BQ6ZMZ0 732 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 C2orf15Q8WU43 125 aaKnown RBP14.7□□□□□ -0.06
CHD3-209ENST00000473376 RAD54LQ92698 747 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 FIZ1Q96SL8 496 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 LRRC3Q9BY71 257 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 ZNF334Q9HCZ1 680 aaPredicted RBP14.7□□□□□ -0.06
CHD3-209ENST00000473376 OBP2AQ9NY56 170 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 SEL1LQ9UBV2 794 aa14.7□□□□□ -0.06
CHD3-209ENST00000473376 MTF2Q9Y483 593 aaPredicted RBP14.7□□□□□ -0.06
CHD3-209ENST00000473376 EP300Q09472 2414 aaPredicted RBP14.69□□□□□ -0.06
CHD3-209ENST00000473376 SOBPA7XYQ1 873 aa14.69□□□□□ -0.06
CHD3-209ENST00000473376 K7ENM7 598 aa14.69□□□□□ -0.06
CHD3-209ENST00000473376 TBCAO75347 108 aaKnown RBP14.69□□□□□ -0.06
CHD3-209ENST00000473376 ODC1P11926 461 aa14.69□□□□□ -0.06
CHD3-209ENST00000473376 SDHBP21912 280 aa14.69□□□□□ -0.06
CHD3-209ENST00000473376 TARSP26639 723 aaKnown RBP14.69□□□□□ -0.06
CHD3-209ENST00000473376 TNFSF9P41273 254 aa14.69□□□□□ -0.06
CHD3-209ENST00000473376 ALDH1A3P47895 512 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms