RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 PDILTQ8N807 584 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 NXPE3Q969Y0 559 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 TBC1D17Q9HA65 648 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 CEP72Q9P209 647 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 MRPS23Q9Y3D9 190 aaKnown RBP18.11■□□□□ 0.49
USP40-212ENST00000473191 STYXL1Q9Y6J8 313 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 MOSPD3O75425 235 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 CPB1P15086 417 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 GJA1P17302 382 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 NASPP49321 788 aaPredicted RBP18.1■□□□□ 0.49
USP40-212ENST00000473191 YWHAHQ04917 246 aaPredicted RBP18.1■□□□□ 0.49
USP40-212ENST00000473191 TWF1Q12792 350 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 FOXD4L6Q3SYB3 417 aaPredicted RBP18.1■□□□□ 0.49
USP40-212ENST00000473191 C9orf57Q5W0N0 161 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 FOXD4L3Q6VB84 417 aaPredicted RBP18.1■□□□□ 0.49
USP40-212ENST00000473191 SV2BQ7L1I2 683 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 EFCAB13Q8IY85 973 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 TTC9BQ8N6N2 239 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 LINC00301Q8NCQ3 95 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 GLIS3Q8NEA6 775 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 APPL2Q8NEU8 664 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 HPS3Q969F9 1004 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 ZSWIM3Q96MP5 696 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 FOXQ1Q9C009 403 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 MRPL44Q9H9J2 332 aaKnown RBP18.1■□□□□ 0.49
USP40-212ENST00000473191 SLC2A4RGQ9NR83 387 aa18.1■□□□□ 0.49
USP40-212ENST00000473191 AGO2Q9UKV8 859 aaKnown RBP18.1■□□□□ 0.49
USP40-212ENST00000473191 ZFP37Q9Y6Q3 630 aaPredicted RBP18.1■□□□□ 0.49
USP40-212ENST00000473191 STK25O00506 426 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 PIRO00625 290 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 OAZ2O95190 189 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 DCNP07585 359 aaKnown RBP18.09■□□□□ 0.49
USP40-212ENST00000473191 PTPN2P17706 415 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 LILRA4P59901 499 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 SNW1Q13573 536 aaKnown RBP18.09■□□□□ 0.49
USP40-212ENST00000473191 TMEM132DQ14C87 1099 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 TANGO2Q6ICL3 276 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 DSTYKQ6XUX3 929 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 BEST2Q8NFU1 509 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 SAAL1Q96ER3 474 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 SENP8Q96LD8 212 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 ARHGEF3Q9NR81 526 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 AFF4Q9UHB7 1163 aaKnown RBP18.09■□□□□ 0.49
USP40-212ENST00000473191 KCNH3Q9ULD8 1083 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 SCN1AP35498 2009 aa18.09■□□□□ 0.49
USP40-212ENST00000473191 NCANO14594 1321 aa18.08■□□□□ 0.49
USP40-212ENST00000473191 ANO9A1A5B4 782 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 FRMD3A2A2Y4 597 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 SOAT2O75908 522 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 GCNT3O95395 438 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 IDEP14735 1019 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 GLULP15104 373 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 FCARP24071 287 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 STAT6P42226 847 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 PKP1Q13835 747 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 TPGS2Q68CL5 300 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 RTL10Q7L3V2 364 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 CCDC105Q8IYK2 499 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 OR10T2Q8NGX3 314 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 POMGNT1Q8WZA1 660 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 DNAJC25Q9H1X3 360 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 ZSCAN16Q9H4T2 348 aaPredicted RBP18.08■□□□□ 0.48
USP40-212ENST00000473191 SLC27A5Q9Y2P5 690 aa18.08■□□□□ 0.48
USP40-212ENST00000473191 MTF2Q9Y483 593 aaPredicted RBP18.08■□□□□ 0.48
USP40-212ENST00000473191 TULP1O00294 542 aaPredicted RBP18.07■□□□□ 0.48
USP40-212ENST00000473191 PRPF6O94906 941 aaKnown RBP18.07■□□□□ 0.48
USP40-212ENST00000473191 CD72P21854 359 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 SCP2P22307 547 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 NUBP1P53384 320 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 DUSP4Q13115 394 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 STK38Q15208 465 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 KYAT1Q16773 422 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 L1TD1Q5T7N2 865 aaKnown RBP18.07■□□□□ 0.48
USP40-212ENST00000473191 OVOS1Q6IE37 1185 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 CCDC73Q6ZRK6 1079 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 DTWD2Q8NBA8 298 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 ATAD1Q8NBU5 361 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 SNX21Q969T3 373 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 BORCS6Q96GS4 357 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 RTP3Q9BQQ7 232 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 AVENQ9NQS1 362 aaPredicted RBP18.07■□□□□ 0.48
USP40-212ENST00000473191 DLGAP2Q9P1A6 1054 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 YIPF1Q9Y548 306 aa18.07■□□□□ 0.48
USP40-212ENST00000473191 MORC2Q9Y6X9 1032 aaPredicted RBP18.07■□□□□ 0.48
USP40-212ENST00000473191 GOLGA8IPA6NC78 632 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 GOLGA8JA6NMD2 632 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 XPOTO43592 962 aaKnown RBP18.06■□□□□ 0.48
USP40-212ENST00000473191 MYL4P12829 197 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 TXLNAP40222 546 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 ANGPT1Q15389 498 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 E2F4Q16254 413 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 FAM78AQ5JUQ0 283 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 SLFN12LQ6IEE8 588 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 SHC4Q6S5L8 630 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 MTSS1LQ765P7 747 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 ASCL5Q7RTU5 278 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 CD302Q8IX05 232 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 SPRYD3Q8NCJ5 442 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 CBWD1Q9BRT8 395 aa18.06■□□□□ 0.48
USP40-212ENST00000473191 FAM213AQ9BRX8 229 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms