RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TEX28O15482 410 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 IL18RAPO95256 599 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 EPCAMP16422 314 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 GLUD2P49448 558 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 LILRA4P59901 499 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 FOXK2Q01167 660 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 C1orf220Q5T0J3 134 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 LLGL2Q6P1M3 1020 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 ADSSL1Q8N142 457 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 RIN2Q8WYP3 895 aaPredicted RBP14.19□□□□□ -0.14
TPM3-216ENST00000473036 SYAP1Q96A49 352 aaPredicted RBP14.19□□□□□ -0.14
TPM3-216ENST00000473036 EEF2KMTQ96G04 330 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 TSPAN18Q96SJ8 248 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 CLSTN3Q9BQT9 956 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 MTMR12Q9C0I1 747 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 CGNQ9P2M7 1197 aaKnown RBP14.19□□□□□ -0.14
TPM3-216ENST00000473036 CDH22Q9UJ99 828 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 HCFC2Q9Y5Z7 792 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 DOCK6Q96HP0 2047 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 TECTAO75443 2155 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 TRIM49BA6NDI0 452 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 M0QZQ0 153 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 TBC1D4O60343 1298 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 SMC2O95347 1197 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 URODP06132 367 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 CA8P35219 290 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 NDUFV1P49821 464 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 CLCN4P51793 760 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 DLG4P78352 724 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 TFAMQ00059 246 aaKnown RBP14.18□□□□□ -0.14
TPM3-216ENST00000473036 MRPL58Q14197 206 aaKnown RBP14.18□□□□□ -0.14
TPM3-216ENST00000473036 PSMD6Q15008 389 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 CLUL1Q15846 466 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 NFIL3Q16649 462 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 CENPPQ6IPU0 288 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 SYCE2Q6PIF2 218 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 TMEM184AQ6ZMB5 413 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.18□□□□□ -0.14
TPM3-216ENST00000473036 CEP57Q86XR8 500 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 BEST2Q8NFU1 509 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 PIK3R5Q8WYR1 880 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 CCDC47Q96A33 483 aaKnown RBP14.18□□□□□ -0.14
TPM3-216ENST00000473036 PBXIP1Q96AQ6 731 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 SUSD3Q96L08 255 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 MED15Q96RN5 788 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 TTPALQ9BTX7 342 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 CLSTN2Q9H4D0 955 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 MRPL17Q9NRX2 175 aaKnown RBP14.18□□□□□ -0.14
TPM3-216ENST00000473036 INTS13Q9NVM9 706 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 RMND1Q9NWS8 449 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 KIAA1468Q9P260 1216 aa14.18□□□□□ -0.14
TPM3-216ENST00000473036 TIMM13Q9Y5L4 95 aaPredicted RBP14.18□□□□□ -0.14
TPM3-216ENST00000473036 C2orf16Q68DN1 1984 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 LRRIQ3A6PVS8 624 aaPredicted RBP14.17□□□□□ -0.14
TPM3-216ENST00000473036 EXOC3O60645 756 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 AKAP3O75969 853 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 ITGB3P05106 788 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 POLR2BP30876 1174 aaKnown RBP14.17□□□□□ -0.14
TPM3-216ENST00000473036 ZXDAP98168 799 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 NFKBIBQ15653 356 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 VARS2Q5ST30 1063 aaKnown RBP14.17□□□□□ -0.14
TPM3-216ENST00000473036 ANKRD40Q6AI12 368 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 NT5DC4Q86YG4 428 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 GLYCTKQ8IVS8 523 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 ZC3H3Q8IXZ2 948 aaKnown RBP14.17□□□□□ -0.14
TPM3-216ENST00000473036 FBXL6Q8N531 539 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 PRSS33Q8NF86 280 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 GOLGA5Q8TBA6 731 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 CCDC127Q96BQ5 260 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 CDCA3Q99618 268 aaPredicted RBP14.17□□□□□ -0.14
TPM3-216ENST00000473036 KIAA1586Q9HCI6 787 aa14.17□□□□□ -0.14
TPM3-216ENST00000473036 CFAP54Q96N23 3096 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 CALUO43852 315 aaPredicted RBP14.16□□□□□ -0.14
TPM3-216ENST00000473036 CST3P01034 146 aaPredicted RBP14.16□□□□□ -0.14
TPM3-216ENST00000473036 SPATA31D3P0C874 917 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 DLATP10515 647 aaKnown RBP14.16□□□□□ -0.14
TPM3-216ENST00000473036 NR2F2P24468 414 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 MCCD1P59942 119 aaPredicted RBP14.16□□□□□ -0.14
TPM3-216ENST00000473036 CLDN10P78369 228 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 SIGLEC14Q08ET2 396 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 MYBPC2Q14324 1141 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 PSMD5Q16401 504 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 LILRA6Q6PI73 481 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 SPATA31D4Q6ZUB0 917 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 PALB2Q86YC2 1186 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 GPR65Q8IYL9 337 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 C12orf76Q8N812 135 aaPredicted RBP14.16□□□□□ -0.14
TPM3-216ENST00000473036 PARD3BQ8TEW8 1205 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 ELMO3Q96BJ8 720 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 CGRRF1Q99675 332 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 DUSP9Q99956 384 aaKnown RBP14.16□□□□□ -0.14
TPM3-216ENST00000473036 RTP3Q9BQQ7 232 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 PHF7Q9BWX1 381 aaPredicted RBP14.16□□□□□ -0.14
TPM3-216ENST00000473036 S1PR5Q9H228 398 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 FNIP2Q9P278 1114 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 MTRRQ9UBK8 725 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 STK39Q9UEW8 545 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
TPM3-216ENST00000473036 CACNA1HO95180 2353 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 ZDBF2Q9HCK1 2354 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms