RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 RUFY4Q6ZNE9 571 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 C15orf39Q6ZRI6 1047 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 PLPPR4Q7Z2D5 763 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 ARMC9Q7Z3E5 817 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 ADGRA3Q8IWK6 1321 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 SHCBP1Q8NEM2 672 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 TAS1R2Q8TE23 839 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 SLC20A1Q8WUM9 679 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 SEMA4DQ92854 862 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 VCPIP1Q96JH7 1222 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 INSM2Q96T92 566 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 NUP85Q9BW27 656 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 COL25A1Q9BXS0 654 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 AP1M1Q9BXS5 423 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 MROH8Q9H579 483 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 MRPL47Q9HD33 250 aaKnown RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 TMPRSS4Q9NRS4 437 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 FEZ2Q9UHY8 353 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 FKBPLQ9UIM3 349 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 PRDM4Q9UKN5 801 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 AGTPBP1Q9UPW5 1226 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 SCINQ9Y6U3 715 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 KIAA1217Q5T5P2 1943 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 ZC3H4Q9UPT8 1303 aaKnown RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 A0A0B4J269 797 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 GSTTP1A0A1W2PQM5 241 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 ERICH4A6NGS2 130 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 UNCXA6NJT0 531 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 TMEM110-MUSTN1A8MSY1 372 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 AGPSO00116 658 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 CLDN3O15551 220 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 PHF2O75151 1096 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 LGR5O75473 907 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 HLA-DRAP01903 254 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 C4BPAP04003 597 aaKnown RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 MMEP08473 750 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 COMTP21964 271 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 CTNNA1P35221 906 aaKnown RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 TCF7P36402 384 aaPredicted RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 EIF3BP55884 814 aaKnown RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 RELBQ01201 579 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 DR1Q01658 176 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 CNTN2Q02246 1040 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 CUL2Q13617 745 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 PRKG1Q13976 671 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 MESDQ14696 234 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 KYAT1Q16773 422 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 INTS6LQ5JSJ4 861 aaKnown RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 TREML2Q5T2D2 321 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 SYDE1Q6ZW31 735 aaPredicted RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 USP50Q70EL3 339 aaPredicted RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 SLC47A2Q86VL8 602 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 WDR49Q8IV35 697 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 IQCKQ8N0W5 287 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 ASAP3Q8TDY4 903 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 ATP8B4Q8TF62 1192 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 SEC14L1Q92503 715 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 GLG1Q92896 1179 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 TMEM143Q96AN5 459 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 FAXDC2Q96IV6 333 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 GDAP1L1Q96MZ0 367 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 MMP19Q99542 508 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 DDX47Q9H0S4 455 aaKnown RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 TSPYL1Q9H0U9 437 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 ZNF395Q9H8N7 513 aaPredicted RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 GPBP1L1Q9HC44 474 aaPredicted RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 HOMER3Q9NSC5 361 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 TAS2R14Q9NYV8 317 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 BTBD7Q9P203 1132 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 CNOT8Q9UFF9 292 aaKnown RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 MTRF1LQ9UGC7 380 aaKnown RBP8.15□□□□□ -1.1
CCDC171-205ENST00000472806 KCNH4Q9UQ05 1017 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 PCDHA3Q9Y5H8 950 aa8.15□□□□□ -1.1
CCDC171-205ENST00000472806 PASKQ96RG2 1323 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 MYH9P35579 1960 aaKnown RBP8.14□□□□□ -1.11
CCDC171-205ENST00000472806 WDR81Q562E7 1941 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 NDC80O14777 642 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 HBP1O60381 514 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 TOM1L1O75674 476 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 CLTAP09496 248 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 MYZAPP0CAP1 466 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 ATP4AP20648 1035 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 MAPK4P31152 587 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 FNTAP49354 379 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 GUCY2FP51841 1108 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 ERVK-9P63128 1117 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 CCNA1P78396 465 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 POU5F1Q01860 360 aaKnown RBP8.14□□□□□ -1.11
CCDC171-205ENST00000472806 SP2Q02086 613 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 CAPSQ13938 189 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 TTLL4Q14679 1199 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 MAPK6Q16659 721 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 ZSCAN26Q16670 478 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 CELF3Q5SZQ8 465 aaKnown RBP8.14□□□□□ -1.11
CCDC171-205ENST00000472806 CDCA2Q69YH5 1023 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-205ENST00000472806 CEP128Q6ZU80 1094 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 TAS1R3Q7RTX0 852 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 BRSK2Q8IWQ3 736 aa8.14□□□□□ -1.11
CCDC171-205ENST00000472806 DHX37Q8IY37 1157 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms