RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TAS1R3Q7RTX0 852 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 GPIHBP1Q8IV16 184 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 TCEAL8Q8IYN2 117 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 KDF1Q8NAX2 398 aaPredicted RBP10.25□□□□□ -0.77
VCL-204ENST00000472585 LRRC3BQ96PB8 259 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 CORO1BQ9BR76 489 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 PIAS3Q9Y6X2 628 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 GCN1Q92616 2671 aaKnown RBP10.25□□□□□ -0.77
VCL-204ENST00000472585 EPB41L2O43491 1005 aaKnown RBP10.24□□□□□ -0.77
VCL-204ENST00000472585 NEMFO60524 1076 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 CDKL5O76039 1030 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 ATF2P15336 505 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 GDI1P31150 447 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 ARPP19P56211 112 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 OSTNP61366 133 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 CCDC6Q16204 474 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 ARSIQ5FYB1 569 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 ATF7IP2Q5U623 682 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 ANKS3Q6ZW76 656 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 ZBTB8OSQ8IWT0 167 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 DIS3L2Q8IYB7 885 aaKnown RBP10.24□□□□□ -0.77
VCL-204ENST00000472585 NSUN7Q8NE18 718 aaKnown RBP10.24□□□□□ -0.77
VCL-204ENST00000472585 MCPH1Q8NEM0 835 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 C18orf25Q96B23 403 aaPredicted RBP10.24□□□□□ -0.77
VCL-204ENST00000472585 NACC1Q96RE7 527 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 POLR3CQ9BUI4 534 aaPredicted RBP10.24□□□□□ -0.77
VCL-204ENST00000472585 LSM14BQ9BX40 385 aaKnown RBP10.24□□□□□ -0.77
VCL-204ENST00000472585 LRRC3Q9BY71 257 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 C2orf40Q9H1Z8 148 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 TUFT1Q9NNX1 390 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 RBM12Q9NTZ6 932 aaKnown RBP10.24□□□□□ -0.77
VCL-204ENST00000472585 FBXL5Q9UKA1 691 aa10.24□□□□□ -0.77
VCL-204ENST00000472585 NBEAQ8NFP9 2946 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 K7ESF4 209 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 ZNF197O14709 1029 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 ZNF263O14978 683 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 MICAL2O94851 1124 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 LRG1P02750 347 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 XBP1P17861 261 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 PSMC3P17980 439 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 CCNE1P24864 410 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 RPA1P27694 616 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 ELF1P32519 619 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 MCM7P33993 719 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 NAMPTP43490 491 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 SOX9P48436 509 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 NOVA1P51513 510 aaKnown RBP10.23□□□□□ -0.77
VCL-204ENST00000472585 FOXC1Q12948 553 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 RNF43Q68DV7 783 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 C1orf228Q6PIY5 440 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 LRSAM1Q6UWE0 723 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 DAW1Q8N136 415 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 C4orf32Q8N8J7 132 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 FAM200AQ8TCP9 573 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 CSGALNACT1Q8TDX6 532 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 LOXL4Q96JB6 756 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 ZBTB45Q96K62 511 aaPredicted RBP10.23□□□□□ -0.77
VCL-204ENST00000472585 ACO2Q99798 780 aaKnown RBP10.23□□□□□ -0.77
VCL-204ENST00000472585 CDT1Q9H211 546 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 CRISPLD1Q9H336 500 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 CYP4F11Q9HBI6 524 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 TRPV5Q9NQA5 729 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 LHX6Q9UPM6 363 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 TNFSF13BQ9Y275 285 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 INSL5Q9Y5Q6 135 aa10.23□□□□□ -0.77
VCL-204ENST00000472585 LAMA1P25391 3075 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 COL4A2P08572 1712 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 PODXLO00592 558 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 PAPSS2O95340 614 aaPredicted RBP10.22□□□□□ -0.77
VCL-204ENST00000472585 KPNA1P52294 538 aaPredicted RBP10.22□□□□□ -0.77
VCL-204ENST00000472585 EPHA5P54756 1037 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 PTGDRQ13258 359 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 TEAD2Q15562 447 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 ZNF174Q15697 407 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 TMEM132AQ24JP5 1023 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 DCAF4L1Q3SXM0 396 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 SEZ6Q53EL9 994 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 STXBP5Q5T5C0 1151 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 TXNDC11Q6PKC3 985 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 RNF19BQ6ZMZ0 732 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 Q6ZS52 159 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 CACNA2D4Q7Z3S7 1137 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 WDR5BQ86VZ2 330 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 DEPTORQ8TB45 409 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 DEPDC1BQ8WUY9 529 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 SMARCD2Q92925 531 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 MSANTD3Q96H12 275 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 CCDC43Q96MW1 224 aaKnown RBP10.22□□□□□ -0.77
VCL-204ENST00000472585 UROC1Q96N76 676 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 ADPGKQ9BRR6 497 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 MKNK1Q9BUB5 465 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 TARS2Q9BW92 718 aaKnown RBP10.22□□□□□ -0.77
VCL-204ENST00000472585 ADAM33Q9BZ11 813 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 TRPV4Q9HBA0 871 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 RXFP3Q9NSD7 469 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 AKAP13Q12802 2813 aa10.22□□□□□ -0.77
VCL-204ENST00000472585 SRRM3A6NNA2 597 aaPredicted RBP10.21□□□□□ -0.77
VCL-204ENST00000472585 HEPACAM2A8MVW5 462 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 PRRG1O14668 218 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 TRAPPC3O43617 180 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms