RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 AUTS2Q8WXX7 1259 aa18.6■□□□□ 0.57
PKD1-208ENST00000472577 EEF2KMTQ96G04 330 aa18.6■□□□□ 0.57
PKD1-208ENST00000472577 HERC2P3Q9BVR0 1158 aa18.6■□□□□ 0.57
PKD1-208ENST00000472577 APOL5Q9BWW9 433 aa18.6■□□□□ 0.57
PKD1-208ENST00000472577 INTS13Q9NVM9 706 aa18.6■□□□□ 0.57
PKD1-208ENST00000472577 DPP3Q9NY33 737 aa18.6■□□□□ 0.57
PKD1-208ENST00000472577 ZDBF2Q9HCK1 2354 aa18.6■□□□□ 0.57
PKD1-208ENST00000472577 ANO9A1A5B4 782 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 I3L4J1 428 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 DLATP10515 647 aaKnown RBP18.59■□□□□ 0.57
PKD1-208ENST00000472577 CTSAP10619 480 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 STX17P56962 302 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 DPCR1Q3MIW9 517 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 C9orf57Q5W0N0 161 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 TTI2Q6NXR4 508 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 TMC7Q7Z402 723 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 WDR49Q8IV35 697 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 B3GALT6Q96L58 329 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 CGRRF1Q99675 332 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 DUSP9Q99956 384 aaKnown RBP18.59■□□□□ 0.57
PKD1-208ENST00000472577 MTMR12Q9C0I1 747 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 ENTPD7Q9NQZ7 604 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 FRMD4BQ9Y2L6 1034 aa18.59■□□□□ 0.57
PKD1-208ENST00000472577 SF3B1O75533 1304 aaKnown RBP eCLIP18.58■□□□□ 0.57
PKD1-208ENST00000472577 HIDE1A8MVS5 230 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 PIRO00625 290 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 MAPK13O15264 365 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 SP100P23497 879 aaPredicted RBP18.58■□□□□ 0.56
PKD1-208ENST00000472577 VCPP55072 806 aaKnown RBP18.58■□□□□ 0.56
PKD1-208ENST00000472577 NLRP12P59046 1061 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 FKBP3Q00688 224 aaKnown RBP18.58■□□□□ 0.56
PKD1-208ENST00000472577 TCF15Q12870 199 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 PAK1Q13153 545 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 PDE12Q6L8Q7 609 aaKnown RBP18.58■□□□□ 0.56
PKD1-208ENST00000472577 LLGL2Q6P1M3 1020 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 SYCE2Q6PIF2 218 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 FAM186BQ8IYM0 893 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 C1orf127Q8N9H9 656 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 MLKLQ8NB16 471 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 CXorf38Q8TB03 319 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 PARD3BQ8TEW8 1205 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 CACTINQ8WUQ7 758 aaKnown RBP18.58■□□□□ 0.56
PKD1-208ENST00000472577 ZNF516Q92618 1163 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 ASIC4Q96FT7 647 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 FNBP1Q96RU3 617 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 CDCA3Q99618 268 aaPredicted RBP18.58■□□□□ 0.56
PKD1-208ENST00000472577 S1PR5Q9H228 398 aa18.58■□□□□ 0.56
PKD1-208ENST00000472577 NGRNQ9NPE2 291 aaKnown RBP18.58■□□□□ 0.56
PKD1-208ENST00000472577 LRRIQ3A6PVS8 624 aaPredicted RBP18.57■□□□□ 0.56
PKD1-208ENST00000472577 CETN3O15182 167 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 CXCL14O95715 111 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 ITGB3P05106 788 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 TMEM191BP0C7N4 346 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 TNNI1P19237 187 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 PSMC2P35998 433 aaKnown RBP18.57■□□□□ 0.56
PKD1-208ENST00000472577 DLG4P78352 724 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 SMC1AQ14683 1233 aaKnown RBP18.57■□□□□ 0.56
PKD1-208ENST00000472577 PTPN14Q15678 1187 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 FAM171A1Q5VUB5 890 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 ANKRD54Q6NXT1 300 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 CAVIN1Q6NZI2 390 aaKnown RBP18.57■□□□□ 0.56
PKD1-208ENST00000472577 FOXR2Q6PJQ5 311 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 FBXL6Q8N531 539 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 MRPL43Q8N983 215 aaKnown RBP18.57■□□□□ 0.56
PKD1-208ENST00000472577 ANKRD36BP1Q96IX9 119 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 MED15Q96RN5 788 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 CHST7Q9NS84 486 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 STK39Q9UEW8 545 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 SIX4Q9UIU6 781 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 NUB1Q9Y5A7 615 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 VWA8A3KMH1 1905 aa18.57■□□□□ 0.56
PKD1-208ENST00000472577 BICDL2A1A5D9 508 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 C2orf71A6NGG8 1288 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 SPTLC1O15269 473 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 LILRB3O75022 631 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 PTMSP20962 102 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 POLR2BP30876 1174 aaKnown RBP18.56■□□□□ 0.56
PKD1-208ENST00000472577 GLUD2P49448 558 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 AARSP49588 968 aaKnown RBP eCLIP18.56■□□□□ 0.56
PKD1-208ENST00000472577 CLDN10P78369 228 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 DSG1Q02413 1049 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 SIGLEC14Q08ET2 396 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 ELAVL2Q12926 359 aaKnown RBP18.56■□□□□ 0.56
PKD1-208ENST00000472577 DUOXA2Q1HG44 320 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 KLHL40Q2TBA0 621 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 USP41Q3LFD5 358 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 RTP2Q5QGT7 225 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 C1orf220Q5T0J3 134 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 KIAA0319Q5VV43 1072 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 TMEM184AQ6ZMB5 413 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 SUGP1Q8IWZ8 645 aaKnown RBP18.56■□□□□ 0.56
PKD1-208ENST00000472577 TMC2Q8TDI7 906 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 BORCS6Q96GS4 357 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 MKNK1Q9BUB5 465 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 ITGA11Q9UKX5 1188 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 USP34Q70CQ2 3546 aa18.56■□□□□ 0.56
PKD1-208ENST00000472577 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.55■□□□□ 0.56
PKD1-208ENST00000472577 C2CD2LO14523 706 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 PDGFBP01127 241 aaPredicted RBP18.55■□□□□ 0.56
PKD1-208ENST00000472577 TNNC2P02585 160 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms