RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 BICDL2A1A5D9 508 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 KPNA7A9QM74 516 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 H3BQ06 376 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-211ENST00000472490 GLP2RO95838 553 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 KRT13P13646 458 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 TYMPP19971 482 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 POLR2BP30876 1174 aaKnown RBP15.32■□□□□ 0.04
BRCA1-211ENST00000472490 WNT7BP56706 349 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 TFF2Q03403 129 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 ENPEPQ07075 957 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 MORC3Q14149 939 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 ZCWPW2Q504Y3 356 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 TJAP1Q5JTD0 557 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 ISM2Q6H9L7 571 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 ZNF280DQ6N043 979 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 CES5AQ6NT32 575 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 ANKRD54Q6NXT1 300 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 METTL23Q86XA0 190 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 TMC2Q8TDI7 906 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 SLC22A17Q8WUG5 538 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 HDAC7Q8WUI4 952 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 MKNK1Q9BUB5 465 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 PLEKHA4Q9H4M7 779 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 CLEC1BQ9P126 229 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 BARX2Q9UMQ3 279 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-211ENST00000472490 AGAP1Q9UPQ3 857 aa15.32■□□□□ 0.04
BRCA1-211ENST00000472490 PRRC2BQ5JSZ5 2229 aaKnown RBP15.31■□□□□ 0.04
BRCA1-211ENST00000472490 BIN1O00499 593 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 IKBKBO14920 756 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 OAZ2O95190 189 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 MBD3O95983 291 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 IGFBP6P24592 240 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-211ENST00000472490 CLDN10P78369 228 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 ITIH3Q06033 890 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 DLX2Q07687 328 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-211ENST00000472490 SMAD4Q13485 552 aaKnown RBP15.31■□□□□ 0.04
BRCA1-211ENST00000472490 RAB33AQ14088 237 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 MRPL58Q14197 206 aaKnown RBP15.31■□□□□ 0.04
BRCA1-211ENST00000472490 CTXN3Q4LDR2 81 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 SLC8B1Q6J4K2 584 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 FOXR2Q6PJQ5 311 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 PALB2Q86YC2 1186 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 FAM186BQ8IYM0 893 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 SMRP1Q8NCR6 262 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 VN1R2Q8NFZ6 395 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 PARD3BQ8TEW8 1205 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 MSLNLQ96KJ4 702 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 SENP8Q96LD8 212 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 CLSTN3Q9BQT9 956 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 SFXN1Q9H9B4 322 aa15.31■□□□□ 0.04
BRCA1-211ENST00000472490 CYB561D2O14569 222 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 TGM5O43548 720 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 PHACTR2O75167 634 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 AKAP3O75969 853 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
BRCA1-211ENST00000472490 EPCAMP16422 314 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 RPL17P18621 184 aaKnown RBP15.3■□□□□ 0.04
BRCA1-211ENST00000472490 CCNE1P24864 410 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 OR1D2P34982 312 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 CASP4P49662 377 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 VAMP7P51809 220 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 TRPC3Q13507 836 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 LMBRD2Q68DH5 695 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-211ENST00000472490 OVOS1Q6IE37 1185 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 PTCRAQ6ISU1 281 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-211ENST00000472490 RTL10Q7L3V2 364 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 TRAPPC11Q7Z392 1133 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 GLYCTKQ8IVS8 523 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 OR5B17Q8NGF7 314 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-211ENST00000472490 POP1Q99575 1024 aaKnown RBP15.3■□□□□ 0.04
BRCA1-211ENST00000472490 CDY1Q9Y6F8 540 aa15.3■□□□□ 0.04
BRCA1-211ENST00000472490 GRXCR2A6NFK2 248 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 OR6C75A6NL08 312 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 PPEF2O14830 753 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 SPTLC1O15269 473 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 SLC16A3O15427 465 aaKnown RBP15.29■□□□□ 0.04
BRCA1-211ENST00000472490 STX10O60499 249 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 HUS1O60921 280 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 CYP11A1P05108 521 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 ATICP31939 592 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 RBM10P98175 930 aaKnown RBP15.29■□□□□ 0.04
BRCA1-211ENST00000472490 BFSP1Q12934 665 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 PAK1Q13153 545 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 BIRC3Q13489 604 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 LIN9Q5TKA1 542 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 ANKRD40Q6AI12 368 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 KLHL10Q6JEL2 608 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 LILRA6Q6PI73 481 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 CYP26C1Q6V0L0 522 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 THEM5Q8N1Q8 247 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 MLKLQ8NB16 471 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 ZNF461Q8TAF7 563 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 SPATA18Q8TC71 538 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 HPDLQ96IR7 371 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 ADAM7Q9H2U9 754 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 MAN1C1Q9NR34 630 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 GDAP2Q9NXN4 497 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 DACH1Q9UI36 760 aa15.29■□□□□ 0.04
BRCA1-211ENST00000472490 MAFFQ9ULX9 164 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms