RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 TYMPP19971 482 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 BMPR1AP36894 532 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 PBX1P40424 430 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 OR1G1P47890 313 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 SLC11A1P49279 550 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 UBXN1Q04323 297 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 KCNMA1Q12791 1236 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 PAN2Q504Q3 1202 aaKnown RBP17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 ZNF667Q5HYK9 610 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 FAM117BQ6P1L5 589 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 PDXDC1Q6P996 788 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 CD300LGQ6UXG3 332 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 TMEM86AQ8N2M4 240 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 TOP6BLQ8N6T0 577 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 IGSF21Q96ID5 467 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 NT5C1BQ96P26 610 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 NUP58Q9BVL2 599 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 PBX4Q9BYU1 374 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 CYP3A43Q9HB55 503 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 GOLGA2P5Q9HBQ8 144 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 GCNT4Q9P109 453 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 SIK3Q9Y2K2 1263 aa17.25■□□□□ 0.35
PCOLCE-205ENST00000472348 SF3B1O75533 1304 aaKnown RBP eCLIP17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 TSC2P49815 1807 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 GOLGA6L3A6NEY3 463 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 CASTOR2A6NHX0 329 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 TACC1O75410 805 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 KRT19P08727 400 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 IBSPP21815 317 aaPredicted RBP17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 PON1P27169 355 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 MYL6P60660 151 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 NOP14P78316 857 aaKnown RBP17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 KRT17Q04695 432 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 ZNF699Q32M78 642 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 TMCO2Q7Z6W1 182 aaPredicted RBP17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 DDX53Q86TM3 631 aaKnown RBP17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 FMNL3Q8IVF7 1028 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 TMEM169Q96HH4 297 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 NAP1L5Q96NT1 182 aaPredicted RBP17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 TGS1Q96RS0 853 aaKnown RBP17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 BCO2Q9BYV7 579 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 NIF3L1Q9GZT8 377 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 MARCH5Q9NX47 278 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 IFNKQ9P0W0 207 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 APEX2Q9UBZ4 518 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 SSX2IPQ9Y2D8 614 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 NUB1Q9Y5A7 615 aa17.24■□□□□ 0.35
PCOLCE-205ENST00000472348 TADA2AO75478 443 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 KIF4AO95239 1232 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 C1RP00736 705 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 HOXD11P31277 338 aaPredicted RBP17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 MRE11P49959 708 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 YWHAEP62258 255 aaKnown RBP17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 GSE1Q14687 1217 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 WDR72Q3MJ13 1102 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 DPY19L2P1Q6NXN4 242 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 C3orf58Q8NDZ4 430 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 APPL2Q8NEU8 664 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 SEMA4DQ92854 862 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 PAAF1Q9BRP4 392 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 C11orf84Q9BUA3 381 aaPredicted RBP17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 XPO4Q9C0E2 1151 aaKnown RBP17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 MYO6Q9UM54 1294 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 PCDHB8Q9UN66 801 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 LAMA3Q16787 3333 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 VWA8A3KMH1 1905 aa17.23■□□□□ 0.35
PCOLCE-205ENST00000472348 PLXNA4Q9HCM2 1894 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 PES1O00541 588 aaKnown RBP17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 CA3P07451 260 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 ODC1P11926 461 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 FGFR3P22607 806 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 GUCY2FP51841 1108 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 TNNC1P63316 161 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 TAP1Q03518 808 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 TRIM14Q14142 442 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 SPOUT1Q5T280 376 aaKnown RBP17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 FAM109BQ6ICB4 259 aaPredicted RBP17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 PDE12Q6L8Q7 609 aaKnown RBP17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 FUT10Q6P4F1 479 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 DNAI2Q9GZS0 605 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 INTS2Q9H0H0 1204 aaKnown RBP17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 LMAN2LQ9H0V9 348 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 MMRN2Q9H8L6 949 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 SLC28A3Q9HAS3 691 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 GRPEL1Q9HAV7 217 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 CHST7Q9NS84 486 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 PUF60Q9UHX1 559 aaKnown RBP17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 IRAK3Q9Y616 596 aa17.22■□□□□ 0.35
PCOLCE-205ENST00000472348 LCHNA4D1U4 455 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 GABRDO14764 452 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 PPEF2O14830 753 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 TEX33O43247 280 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 HUS1O60921 280 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 OAZ2O95190 189 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 SOD2P04179 222 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 SLC9A1P19634 815 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 CDC25BP30305 580 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 LHX1P48742 406 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 RABGGTBP53611 331 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms