RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 CYP2J2P51589 502 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 DSG1Q02413 1049 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 EHHADHQ08426 723 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 ELAVL2Q12926 359 aaKnown RBP12.87□□□□□ -0.35
CLRN1-205ENST00000472224 RTP2Q5QGT7 225 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 DCLRE1AQ6PJP8 1040 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 DGLUCYQ7Z3D6 616 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 RNF168Q8IYW5 571 aaPredicted RBP12.87□□□□□ -0.35
CLRN1-205ENST00000472224 FMR1NBQ8N0W7 255 aaPredicted RBP12.87□□□□□ -0.35
CLRN1-205ENST00000472224 PDCD7Q8N8D1 485 aaKnown RBP12.87□□□□□ -0.35
CLRN1-205ENST00000472224 KIAA0895Q8NCT3 520 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 SCFD1Q8WVM8 642 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 CASP10Q92851 521 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 KLHL5Q96PQ7 755 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 TTPALQ9BTX7 342 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 AGPAT3Q9NRZ7 376 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 CDH22Q9UJ99 828 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 C2orf16Q68DN1 1984 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 TSC2P49815 1807 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 CLIC2O15247 247 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 TEX28O15482 410 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 TRAPPC3O43617 180 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 EXTL3O43909 919 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 IL18RAPO95256 599 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 TKTP29401 623 aaKnown RBP12.86□□□□□ -0.35
CLRN1-205ENST00000472224 RPL9P32969 192 aaKnown RBP12.86□□□□□ -0.35
CLRN1-205ENST00000472224 HOXD13P35453 343 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 PLCB2Q00722 1185 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 DPYDQ12882 1025 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 PNOCQ13519 176 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 MTMR3Q13615 1198 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 KCNC3Q14003 757 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 PSMD5Q16401 504 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 KIAA0319Q5VV43 1072 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 CRELD2Q6UXH1 353 aaPredicted RBP12.86□□□□□ -0.35
CLRN1-205ENST00000472224 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
CLRN1-205ENST00000472224 HS2ST1Q7LGA3 356 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 PPFIBP1Q86W92 1011 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 BRSK2Q8IWQ3 736 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 CD302Q8IX05 232 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 GPD1LQ8N335 351 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 ZNF507Q8TCN5 953 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 HSPBP1Q9NZL4 362 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 IRAK3Q9Y616 596 aa12.86□□□□□ -0.35
CLRN1-205ENST00000472224 PPEF2O14830 753 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 GADD45BO75293 160 aaPredicted RBP12.85□□□□□ -0.35
CLRN1-205ENST00000472224 EFEMP2O95967 443 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 LDHAP00338 332 aaKnown RBP12.85□□□□□ -0.35
CLRN1-205ENST00000472224 GLUD1P00367 558 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 WNT7BP56706 349 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
CLRN1-205ENST00000472224 CREMQ03060 361 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 STK4Q13043 487 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 KNOP1Q1ED39 458 aaKnown RBP12.85□□□□□ -0.35
CLRN1-205ENST00000472224 RARS2Q5T160 578 aaKnown RBP12.85□□□□□ -0.35
CLRN1-205ENST00000472224 CWF19L1Q69YN2 538 aaKnown RBP12.85□□□□□ -0.35
CLRN1-205ENST00000472224 ANKRD54Q6NXT1 300 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 KANK3Q6NY19 840 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 SYCE2Q6PIF2 218 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 CD300LGQ6UXG3 332 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 PALB2Q86YC2 1186 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 CBWD2Q8IUF1 395 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 EFCAB13Q8IY85 973 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 UBALD2Q8IYN6 164 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 RDH13Q8NBN7 331 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 ERCC4Q92889 916 aaPredicted RBP12.85□□□□□ -0.35
CLRN1-205ENST00000472224 ASB7Q9H672 318 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLRN1-205ENST00000472224 CHST7Q9NS84 486 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 SORCS3Q9UPU3 1222 aa12.85□□□□□ -0.35
CLRN1-205ENST00000472224 KIAA0391O15091 583 aaKnown RBP12.84□□□□□ -0.35
CLRN1-205ENST00000472224 TGFB1I1O43294 461 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 KINO60870 393 aaKnown RBP12.84□□□□□ -0.35
CLRN1-205ENST00000472224 LILRB3O75022 631 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 SPATA31D3P0C874 917 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 CYP3A5P20815 502 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 LRPAP1P30533 357 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 CLCN4P51793 760 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 PSMD2Q13200 908 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 SNW1Q13573 536 aaKnown RBP12.84□□□□□ -0.35
CLRN1-205ENST00000472224 BMT2Q1RMZ1 405 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 SPATA1Q5VX52 437 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 LMBRD2Q68DH5 695 aaPredicted RBP12.84□□□□□ -0.35
CLRN1-205ENST00000472224 DSTYKQ6XUX3 929 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 TMEM184AQ6ZMB5 413 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 SPATA31D4Q6ZUB0 917 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 C12orf76Q8N812 135 aaPredicted RBP12.84□□□□□ -0.35
CLRN1-205ENST00000472224 SLC22A17Q8WUG5 538 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 FAM84AQ96KN4 292 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 PDE11AQ9HCR9 933 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 MAN1C1Q9NR34 630 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 DZANK1Q9NVP4 752 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 DPP3Q9NY33 737 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
CLRN1-205ENST00000472224 MAPK8IP1Q9UQF2 711 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 DERAQ9Y315 318 aa12.84□□□□□ -0.35
CLRN1-205ENST00000472224 C2CD2Q9Y426 696 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms