RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 XPO4Q9C0E2 1151 aaKnown RBP18.1■□□□□ 0.49
CCM2-205ENST00000472223 GRPEL1Q9HAV7 217 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 DSEQ9UL01 958 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 SNX9Q9Y5X1 595 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 COL4A6Q14031 1691 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 A0A1W2PQC6 194 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 LCHNA4D1U4 455 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 ASS1P00966 412 aaKnown RBP18.09■□□□□ 0.49
CCM2-205ENST00000472223 TPM1P09493 284 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 ODC1P11926 461 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 MYOGP15173 224 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 PON1P27169 355 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 MRE11P49959 708 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 LRMPQ12912 555 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 SYCP1Q15431 976 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 KIAA1841Q6NSI8 718 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 TRIM65Q6PJ69 517 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 DPH6Q7L8W6 267 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 APTXQ7Z2E3 356 aaKnown RBP18.09■□□□□ 0.49
CCM2-205ENST00000472223 PPM1KQ8N3J5 372 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 TTC39CQ8N584 583 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 APPL2Q8NEU8 664 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 SEMA4DQ92854 862 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 IGSF21Q96ID5 467 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 ERGIC2Q96RQ1 377 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 PI4K2AQ9BTU6 479 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 C11orf84Q9BUA3 381 aaPredicted RBP18.09■□□□□ 0.49
CCM2-205ENST00000472223 NUP58Q9BVL2 599 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 LSM14BQ9BX40 385 aaKnown RBP18.09■□□□□ 0.49
CCM2-205ENST00000472223 VRTNQ9H8Y1 702 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■■■■ 102.1
CCM2-205ENST00000472223 CACNG4Q9UBN1 327 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 COLQQ9Y215 455 aaPredicted RBP18.09■□□□□ 0.49
CCM2-205ENST00000472223 DAAM1Q9Y4D1 1078 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 GBF1Q92538 1859 aa18.09■□□□□ 0.49
CCM2-205ENST00000472223 CYB561D2O14569 222 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 TEX33O43247 280 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 SLC9A1P19634 815 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 RFX1P22670 979 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 PBX3P40426 434 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 MFAP3P55082 362 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 ENOSF1Q7L5Y1 443 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 SLC39A11Q8N1S5 342 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 TIFAQ96CG3 184 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 IQCDQ96DY2 449 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 SENP8Q96LD8 212 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 NIF3L1Q9GZT8 377 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 NKX2-4Q9H2Z4 354 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 PRO3102Q9H379 93 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 GDAP2Q9NXN4 497 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 HCSTQ9UBK5 93 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 APEX2Q9UBZ4 518 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 SSX2IPQ9Y2D8 614 aa18.08■□□□□ 0.48
CCM2-205ENST00000472223 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.08■□□□□ 0.48
CCM2-205ENST00000472223 PPEF2O14830 753 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 B4GALT3O60512 393 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 LPXNO60711 386 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 FGF18O76093 207 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 FAM163BP0C2L3 166 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 DNAJB2P25686 324 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 PBX2P40425 430 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 USP41Q3LFD5 358 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 LRIT3Q3SXY7 679 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 FAM171A1Q5VUB5 890 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 FUT10Q6P4F1 479 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 PDXDC1Q6P996 788 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 CACNA2D4Q7Z3S7 1137 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 CEP57Q86XR8 500 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 DRC7Q8IY82 874 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 THEM5Q8N1Q8 247 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 TMEM86AQ8N2M4 240 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 TOP6BLQ8N6T0 577 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 CXorf38Q8TB03 319 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 SUSD3Q96L08 255 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 XYLT2Q9H1B5 865 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 SNX25Q9H3E2 840 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 CYP3A43Q9HB55 503 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 UBE2TQ9NPD8 197 aaPredicted RBP18.07■□□□□ 0.48
CCM2-205ENST00000472223 PLCB1Q9NQ66 1216 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 FAM207AQ9NSI2 230 aaPredicted RBP18.07■□□□□ 0.48
CCM2-205ENST00000472223 PCDHB8Q9UN66 801 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 NLRC5Q86WI3 1866 aa18.07■□□□□ 0.48
CCM2-205ENST00000472223 SCN1AP35498 2009 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 SYN3O14994 580 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 BRCC3P46736 316 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 ERVK-21P61565 698 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 PLCB3Q01970 1234 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 TIGD5Q53EQ6 642 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 SPOPLQ6IQ16 392 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 DDX53Q86TM3 631 aaKnown RBP18.06■□□□□ 0.48
CCM2-205ENST00000472223 KLHL23Q8NBE8 558 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 C3orf58Q8NDZ4 430 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 FBXO22Q8NEZ5 403 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 ZNF397Q8NF99 534 aaPredicted RBP18.06■□□□□ 0.48
CCM2-205ENST00000472223 FAM124BQ9H5Z6 455 aaPredicted RBP18.06■□□□□ 0.48
CCM2-205ENST00000472223 MTUS1Q9ULD2 1270 aa18.06■□□□□ 0.48
CCM2-205ENST00000472223 YBX2Q9Y2T7 364 aaKnown RBP18.06■□□□□ 0.48
CCM2-205ENST00000472223 GOLGA6L6A8MZA4 724 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 M0QZQ0 153 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 TYMPP19971 482 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms