RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 ZNF461Q8TAF7 563 aa9.9□□□□□ -0.82
SYN3-211ENST00000472027 SMG7Q92540 1137 aaKnown RBP9.9□□□□□ -0.82
SYN3-211ENST00000472027 CCDC47Q96A33 483 aaKnown RBP9.9□□□□□ -0.82
SYN3-211ENST00000472027 ZNF707Q96C28 371 aaPredicted RBP9.9□□□□□ -0.82
SYN3-211ENST00000472027 BORCS6Q96GS4 357 aa9.9□□□□□ -0.82
SYN3-211ENST00000472027 SENP8Q96LD8 212 aa9.9□□□□□ -0.82
SYN3-211ENST00000472027 RHOBTB2Q9BYZ6 727 aa9.9□□□□□ -0.82
SYN3-211ENST00000472027 PRKD2Q9BZL6 878 aa9.9□□□□□ -0.82
SYN3-211ENST00000472027 PIDD1Q9HB75 910 aa9.9□□□□□ -0.82
SYN3-211ENST00000472027 TSHZ2Q9NRE2 1034 aa9.9□□□□□ -0.82
SYN3-211ENST00000472027 CGNQ9P2M7 1197 aaKnown RBP9.9□□□□□ -0.82
SYN3-211ENST00000472027 FBXL5Q9UKA1 691 aa9.9□□□□□ -0.82
SYN3-211ENST00000472027 NR2E1Q9Y466 385 aa9.9□□□□□ -0.82
SYN3-211ENST00000472027 CITO14578 2027 aa9.9□□□□□ -0.82
SYN3-211ENST00000472027 WDR27A2RRH5 827 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 C2CD4DB7Z1M9 353 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 CYB561D2O14569 222 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 ABLIM3O94929 683 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 RHOBTB3O94955 611 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 OAZ2O95190 189 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 ITGB3P05106 788 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 ODC1P11926 461 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 ALADP13716 330 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 TYMPP19971 482 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 KCNA4P22459 653 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 ELF1P32519 619 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 TAF6P49848 677 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 CYP2J2P51589 502 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 SNW1Q13573 536 aaKnown RBP9.89□□□□□ -0.83
SYN3-211ENST00000472027 LIN9Q5TKA1 542 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 SCARA3Q6AZY7 606 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 ZNF280DQ6N043 979 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 USP37Q86T82 979 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 C12orf56Q8IXR9 622 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 CSGALNACT2Q8N6G5 542 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 C1orf127Q8N9H9 656 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 XXYLT1Q8NBI6 393 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 ENGASEQ8NFI3 743 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 SLC7A14Q8TBB6 771 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 CCDC34Q96HJ3 373 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 FAM84AQ96KN4 292 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 OXCT2Q9BYC2 517 aaPredicted RBP9.89□□□□□ -0.83
SYN3-211ENST00000472027 KCTD10Q9H3F6 313 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 WDR6Q9NNW5 1121 aaKnown RBP9.89□□□□□ -0.83
SYN3-211ENST00000472027 INTS13Q9NVM9 706 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 MUTYHQ9UIF7 546 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 AGAP1Q9UPQ3 857 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 USTQ9Y2C2 406 aa9.89□□□□□ -0.83
SYN3-211ENST00000472027 TCHHQ07283 1943 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 PLXNA3P51805 1871 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 ARHGEF37A1IGU5 675 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 KPNA7A9QM74 516 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 DCXO43602 365 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 KRT19P08727 400 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 HNRNPA1P09651 372 aaKnown RBP eCLIP9.88□□□□□ -0.83
SYN3-211ENST00000472027 TMEM191BP0C7N4 346 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 ATF2P15336 505 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 POLR2BP30876 1174 aaKnown RBP9.88□□□□□ -0.83
SYN3-211ENST00000472027 HOXA9P31269 272 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 FAM160A1Q05DH4 1040 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 PNOCQ13519 176 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 KCNB1Q14721 858 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 SNRNP35Q16560 246 aaKnown RBP9.88□□□□□ -0.83
SYN3-211ENST00000472027 DUOXA2Q1HG44 320 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 SV2CQ496J9 727 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 TPGS2Q68CL5 300 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 LMBRD2Q68DH5 695 aaPredicted RBP9.88□□□□□ -0.83
SYN3-211ENST00000472027 OVOS1Q6IE37 1185 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 RNF19BQ6ZMZ0 732 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 CCDC149Q6ZUS6 474 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 RTL10Q7L3V2 364 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 GRASPQ7Z6J2 395 aaPredicted RBP9.88□□□□□ -0.83
SYN3-211ENST00000472027 PLCD3Q8N3E9 789 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 OR5B17Q8NGF7 314 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 CXorf38Q8TB03 319 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 GOLGA5Q8TBA6 731 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 ACSF2Q96CM8 615 aaPredicted RBP9.88□□□□□ -0.83
SYN3-211ENST00000472027 ANKRD36BP1Q96IX9 119 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 FNBP1Q96RU3 617 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 MTMR12Q9C0I1 747 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 CYP4F11Q9HBI6 524 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 DMAC2Q9NW81 257 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 CHMP5Q9NZZ3 219 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 ITGA11Q9UKX5 1188 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 VWA8A3KMH1 1905 aa9.88□□□□□ -0.83
SYN3-211ENST00000472027 PDCD11Q14690 1871 aaKnown RBP9.87□□□□□ -0.83
SYN3-211ENST00000472027 PTPRJQ12913 1337 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 A0A0C4DFX4 3053 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 OR6C75A6NL08 312 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 PDXKO00764 312 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 CCL16O15467 120 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 EXOC3O60645 756 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 KIF20AO95235 890 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 SEC24AO95486 1093 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 TNNC2P02585 160 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 CYP11A1P05108 521 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 OR4Q2P0C623 313 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 DLATP10515 647 aaKnown RBP9.87□□□□□ -0.83
SYN3-211ENST00000472027 CPB1P15086 417 aa9.87□□□□□ -0.83
SYN3-211ENST00000472027 TNNI1P19237 187 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms