RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 MCM7P33993 719 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 CLCNKBP51801 687 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 WNT7BP56706 349 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 ROR1Q01973 937 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 UPP1Q16831 310 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 GLRA4Q5JXX5 417 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 CYP4A22Q5TCH4 519 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 TPGS2Q68CL5 300 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 SLC8B1Q6J4K2 584 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 PDZD4Q76G19 769 aaPredicted RBP10□□□□□ -0.81
CPSF4-211ENST00000471455 DCLK2Q8N568 766 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 IRF7Q92985 503 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 MCRS1Q96EZ8 462 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 MSANTD3Q96H12 275 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 MRGPRX2Q96LB1 330 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 PPP1R10Q96QC0 940 aaKnown RBP10□□□□□ -0.81
CPSF4-211ENST00000471455 RAB34Q9BZG1 259 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 BRD9Q9H8M2 597 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 ZFP14Q9HCL3 533 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 HCFC1R1Q9NWW0 138 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 USP18Q9UMW8 372 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 TNFSF13BQ9Y275 285 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 NUB1Q9Y5A7 615 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 F5P12259 2224 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 DOCK6Q96HP0 2047 aa10□□□□□ -0.81
CPSF4-211ENST00000471455 VWA8A3KMH1 1905 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 EPG5Q9HCE0 2579 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 SPTBN2O15020 2390 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 K7ERI5 159 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 PODXLO00592 558 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 LILRB5O75023 590 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 FDPSP14324 419 aaKnown RBP9.99□□□□□ -0.81
CPSF4-211ENST00000471455 ATF2P15336 505 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 TARSP26639 723 aaKnown RBP9.99□□□□□ -0.81
CPSF4-211ENST00000471455 RPL9P32969 192 aaKnown RBP9.99□□□□□ -0.81
CPSF4-211ENST00000471455 GRM5P41594 1212 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 CCR3P51677 355 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 SH3BP2P78314 561 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 DMP1Q13316 513 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-211ENST00000471455 GNL2Q13823 731 aaKnown RBP9.99□□□□□ -0.81
CPSF4-211ENST00000471455 ZNF568Q3ZCX4 644 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 EEF1DP3Q658K8 133 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 ZNF280DQ6N043 979 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 TCEAL8Q8IYN2 117 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 NSUN7Q8NE18 718 aaKnown RBP9.99□□□□□ -0.81
CPSF4-211ENST00000471455 APPL2Q8NEU8 664 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 DEPDC1BQ8WUY9 529 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 BSNDQ8WZ55 320 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 NELL1Q92832 810 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 E2F7Q96AV8 911 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 CORO1BQ9BR76 489 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 RTKNQ9BST9 563 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 TRMT61BQ9BVS5 477 aaKnown RBP9.99□□□□□ -0.81
CPSF4-211ENST00000471455 MRPL4Q9BYD3 311 aaKnown RBP9.99□□□□□ -0.81
CPSF4-211ENST00000471455 CYP4F11Q9HBI6 524 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 TRPV5Q9NQA5 729 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 HEBP1Q9NRV9 189 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 KCNG1Q9UIX4 513 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 MTF2Q9Y483 593 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-211ENST00000471455 ACACBO00763 2458 aa9.99□□□□□ -0.81
CPSF4-211ENST00000471455 A0A087WWV3 80 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 SMIM28A0A1B0GU29 152 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 CCDC169A6NNP5 214 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 FOXD2O60548 495 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-211ENST00000471455 ABLIM3O94929 683 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 MCF2P10911 925 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 CEBPBP17676 345 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 PSMC3P17980 439 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 CD72P21854 359 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 CCT6AP40227 531 aaKnown RBP9.98□□□□□ -0.81
CPSF4-211ENST00000471455 TRAPPC10P48553 1259 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 ARPP19P56211 112 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 PLD1Q13393 1074 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 ME3Q16798 604 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 SLC5A9Q2M3M2 681 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 CTXN3Q4LDR2 81 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 NECAB1Q8N987 351 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 SMARCD2Q92925 531 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 DRC1Q96MC2 740 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 ZNF512Q96ME7 567 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-211ENST00000471455 TCHPQ9BT92 498 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 KIFC3Q9BVG8 833 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 OXCT2Q9BYC2 517 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-211ENST00000471455 GPR88Q9GZN0 384 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 TMEM60Q9H2L4 133 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 BHMT2Q9H2M3 363 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 CHRDQ9H2X0 955 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 ASAH2Q9NR71 780 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 NOL7Q9UMY1 257 aaKnown RBP9.98□□□□□ -0.81
CPSF4-211ENST00000471455 RBM19Q9Y4C8 960 aaKnown RBP9.98□□□□□ -0.81
CPSF4-211ENST00000471455 INSL5Q9Y5Q6 135 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 WDR87Q6ZQQ6 2873 aa9.98□□□□□ -0.81
CPSF4-211ENST00000471455 DCHS1Q96JQ0 3298 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 WDR27A2RRH5 827 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 I3L4J1 428 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 LRP3O75074 770 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 KCNE1P15382 129 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 MCM4P33991 863 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 BRCC3P46736 316 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 MLLT6P55198 1093 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms