RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 TCEAL8Q8IYN2 117 aa16.67■□□□□ 0.26
COL1A1-203ENST00000471344 HS6ST3Q8IZP7 471 aa16.67■□□□□ 0.26
COL1A1-203ENST00000471344 LINC00301Q8NCQ3 95 aa16.67■□□□□ 0.26
COL1A1-203ENST00000471344 APPL2Q8NEU8 664 aa16.67■□□□□ 0.26
COL1A1-203ENST00000471344 PGLYRP2Q96PD5 576 aa16.67■□□□□ 0.26
COL1A1-203ENST00000471344 TMEM209Q96SK2 561 aa16.67■□□□□ 0.26
COL1A1-203ENST00000471344 PRRX2Q99811 253 aa16.67■□□□□ 0.26
COL1A1-203ENST00000471344 CORO1BQ9BR76 489 aa16.67■□□□□ 0.26
COL1A1-203ENST00000471344 ZSCAN16Q9H4T2 348 aaPredicted RBP16.67■□□□□ 0.26
COL1A1-203ENST00000471344 MRPL44Q9H9J2 332 aaKnown RBP16.67■□□□□ 0.26
COL1A1-203ENST00000471344 AGO2Q9UKV8 859 aaKnown RBP16.67■□□□□ 0.26
COL1A1-203ENST00000471344 STYXL1Q9Y6J8 313 aa16.67■□□□□ 0.26
COL1A1-203ENST00000471344 MORC2Q9Y6X9 1032 aaPredicted RBP16.67■□□□□ 0.26
COL1A1-203ENST00000471344 LRG1P02750 347 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 IDEP14735 1019 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 ELF1P32519 619 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 LILRA4P59901 499 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 GPC5P78333 572 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 YWHAHQ04917 246 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-203ENST00000471344 STK38Q15208 465 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 KYAT1Q16773 422 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 PRSS36Q5K4E3 855 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 SCARA3Q6AZY7 606 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 DSTYKQ6XUX3 929 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 EFCAB13Q8IY85 973 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 GLIS3Q8NEA6 775 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 BEST2Q8NFU1 509 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 POMGNT1Q8WZA1 660 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 HPS3Q969F9 1004 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 SNX21Q969T3 373 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 NXPE3Q969Y0 559 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 SAAL1Q96ER3 474 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 MCRS1Q96EZ8 462 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 CEP72Q9P209 647 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 WNT16Q9UBV4 365 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 MRPS23Q9Y3D9 190 aaKnown RBP16.66■□□□□ 0.26
COL1A1-203ENST00000471344 CFAP54Q96N23 3096 aa16.66■□□□□ 0.26
COL1A1-203ENST00000471344 FRMD3A2A2Y4 597 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 OAZ2O95190 189 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 GCNT3O95395 438 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 TWF1Q12792 350 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 PKP1Q13835 747 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 L1TD1Q5T7N2 865 aaKnown RBP16.65■□□□□ 0.26
COL1A1-203ENST00000471344 TPGS2Q68CL5 300 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 CCDC73Q6ZRK6 1079 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 TTC9BQ8N6N2 239 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 ATOH1Q92858 354 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-203ENST00000471344 HVCN1Q96D96 273 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 SENP8Q96LD8 212 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 PLA2G2FQ9BZM2 168 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 TBC1D17Q9HA65 648 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 ARHGEF3Q9NR81 526 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 SEL1LQ9UBV2 794 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 AFF4Q9UHB7 1163 aaKnown RBP16.65■□□□□ 0.26
COL1A1-203ENST00000471344 KCNH3Q9ULD8 1083 aa16.65■□□□□ 0.26
COL1A1-203ENST00000471344 ZFP37Q9Y6Q3 630 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-203ENST00000471344 ANO9A1A5B4 782 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 STK25O00506 426 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 PIRO00625 290 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 SPTLC2O15270 562 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 XPOTO43592 962 aaKnown RBP16.64■□□□□ 0.25
COL1A1-203ENST00000471344 SOAT2O75908 522 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 GJA1P17302 382 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 GAP43P17677 238 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 PTPN2P17706 415 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 E2F4Q16254 413 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 OVOS1Q6IE37 1185 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 RTL10Q7L3V2 364 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 SPRYD3Q8NCJ5 442 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 OR10T2Q8NGX3 314 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 FAM213AQ9BRX8 229 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 FOXQ1Q9C009 403 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 SLC2A4RGQ9NR83 387 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 PANK4Q9NVE7 773 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 YIPF1Q9Y548 306 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 WDR87Q6ZQQ6 2873 aa16.64■□□□□ 0.25
COL1A1-203ENST00000471344 ZFHX2Q9C0A1 2572 aaPredicted RBP16.64■□□□□ 0.25
COL1A1-203ENST00000471344 TCHHQ07283 1943 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 GOLGA8IPA6NC78 632 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 GOLGA8JA6NMD2 632 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 TULP1O00294 542 aaPredicted RBP16.63■□□□□ 0.25
COL1A1-203ENST00000471344 LRRN2O75325 713 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 MOSPD3O75425 235 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 PRPF6O94906 941 aaKnown RBP16.63■□□□□ 0.25
COL1A1-203ENST00000471344 DCNP07585 359 aaKnown RBP16.63■□□□□ 0.25
COL1A1-203ENST00000471344 FCARP24071 287 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 ABCD1P33897 745 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 TANGO2Q6ICL3 276 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 SLFN12LQ6IEE8 588 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 SHC4Q6S5L8 630 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 MTSS1LQ765P7 747 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 USP37Q86T82 979 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 CD302Q8IX05 232 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 CCDC105Q8IYK2 499 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 ZSWIM3Q96MP5 696 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 ACCSQ96QU6 501 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 RTP3Q9BQQ7 232 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 CBWD1Q9BRT8 395 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 DNAJC25Q9H1X3 360 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms