RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TMEM270Q6UE05 265 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 TRIM72Q6ZMU5 477 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 HACE1Q8IYU2 909 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 TTC39CQ8N584 583 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 LRRC52Q8N7C0 313 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 BEST2Q8NFU1 509 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 CTNNBL1Q8WYA6 563 aaPredicted RBP10.04□□□□□ -0.8
VPS52-216ENST00000471309 RFFLQ8WZ73 363 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 HPDLQ96IR7 371 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 CALR3Q96L12 384 aaKnown RBP10.04□□□□□ -0.8
VPS52-216ENST00000471309 ZMAT2Q96NC0 199 aaKnown RBP10.04□□□□□ -0.8
VPS52-216ENST00000471309 PCDHB18PQ96TA0 734 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 TRAIPQ9BWF2 469 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 UNC93B1Q9H1C4 597 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 CYP3A43Q9HB55 503 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 ACP6Q9NPH0 428 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 CISHQ9NSE2 258 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 WBP1LQ9NX94 342 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 TUBGCP4Q9UGJ1 667 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 SALL4Q9UJQ4 1053 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 AGAP1Q9UPQ3 857 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 JRKLQ9Y4A0 524 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.04□□□□□ -0.8
VPS52-216ENST00000471309 MRFAP1Q9Y605 127 aa10.04□□□□□ -0.8
VPS52-216ENST00000471309 ARVCFO00192 962 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 SLU7O95391 586 aaKnown RBP10.03□□□□□ -0.8
VPS52-216ENST00000471309 CD4P01730 458 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 AKAP5P24588 427 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 HADHBP55084 474 aaKnown RBP10.03□□□□□ -0.8
VPS52-216ENST00000471309 TNNC1P63316 161 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 MYO1EQ12965 1108 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 CLEC16AQ2KHT3 1053 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 WDR72Q3MJ13 1102 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 PAPD7Q5XG87 772 aaKnown RBP10.03□□□□□ -0.8
VPS52-216ENST00000471309 SCARA5Q6ZMJ2 495 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 RHOT2Q8IXI1 618 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 APOL6Q9BWW8 343 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 TANC1Q9C0D5 1861 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 AGO3Q9H9G7 860 aaKnown RBP10.03□□□□□ -0.8
VPS52-216ENST00000471309 FAM105AQ9NUU6 356 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 TAS2R14Q9NYV8 317 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 NXF1Q9UBU9 619 aaKnown RBP10.03□□□□□ -0.8
VPS52-216ENST00000471309 PADI3Q9ULW8 664 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 POLIQ9UNA4 740 aa10.03□□□□□ -0.8
VPS52-216ENST00000471309 UQCRHLA0A096LP55 91 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 SMIM28A0A1B0GU29 152 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 GRID2IPA4D2P6 1211 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 TMCO5BA8MYB1 307 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 TLR3O15455 904 aaKnown RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 CTIFO43310 598 aaKnown RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 BUB1O43683 1085 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 PALMO75781 387 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 LSM8O95777 96 aaKnown RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 FTLP02792 175 aaPredicted RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 CYP1A1P04798 512 aaPredicted RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 ATP1A1P05023 1023 aaKnown RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 UQCRHP07919 91 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 PAEPP09466 180 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 WEE2P0C1S8 567 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 GHRP10912 638 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 CKBP12277 381 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 UNGP13051 313 aaPredicted RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 ZSCAN20P17040 1043 aaPredicted RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 ATF7P17544 494 aaPredicted RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 CD58P19256 250 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 CD52P31358 61 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 GUCY2FP51841 1108 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 CENPCQ03188 943 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 INCA1Q0VD86 236 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 NFX1Q12986 1120 aaKnown RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 DSC3Q14574 896 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 GLRA4Q5JXX5 417 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 ZNF618Q5T7W0 954 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 C9orf57Q5W0N0 161 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 ACAD10Q6JQN1 1059 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 TRAF7Q6Q0C0 670 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 MRPL10Q7Z7H8 261 aaKnown RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 CAGE1Q8TC20 777 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 C18orf25Q96B23 403 aaPredicted RBP10.02□□□□□ -0.81
VPS52-216ENST00000471309 TRIM11Q96F44 468 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 ZNF560Q96MR9 790 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 THAP2Q9H0W7 228 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 SDCBP2Q9H190 292 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 TRPV6Q9H1D0 765 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 CXCL16Q9H2A7 254 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 PARP2Q9UGN5 583 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 CDC23Q9UJX2 597 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 GTF3C4Q9UKN8 822 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 OGDHLQ9ULD0 1010 aa10.02□□□□□ -0.81
VPS52-216ENST00000471309 PIRO00625 290 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 ENC1O14682 589 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 PTGESO14684 152 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 THAP12O43422 761 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 ZNF623O75123 536 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 CILPO75339 1184 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 MTA2O94776 668 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 MYBL1P10243 752 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 SKIP12755 728 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 CCL5P13501 91 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 ITGA4P13612 1032 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms