RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 SLC11A1P49279 550 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 LILRA4P59901 499 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 POLR2FP61218 127 aaKnown RBP12.47□□□□□ -0.41
FN1-217ENST00000471193 CUL2Q13617 745 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 BTG3Q14201 252 aaPredicted RBP12.47□□□□□ -0.41
FN1-217ENST00000471193 SHHQ15465 462 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 WDR72Q3MJ13 1102 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 CD300LGQ6UXG3 332 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 BAP1Q92560 729 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 RABGGTAQ92696 567 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 KAT5Q92993 513 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 FAM81BQ96LP2 452 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 KREMEN1Q96MU8 473 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 ARID3AQ99856 593 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 BCO2Q9BYV7 579 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 EDEM3Q9BZQ6 932 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 UBE2OQ9C0C9 1292 aaKnown RBP12.47□□□□□ -0.41
FN1-217ENST00000471193 MARCH5Q9NX47 278 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 GDAP2Q9NXN4 497 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 IMPACTQ9P2X3 320 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 DNAJC12Q9UKB3 198 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 POLIQ9UNA4 740 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 PRG3Q9Y2Y8 225 aaPredicted RBP12.47□□□□□ -0.41
FN1-217ENST00000471193 MRPL42Q9Y6G3 142 aaKnown RBP12.47□□□□□ -0.41
FN1-217ENST00000471193 KIAA1671Q9BY89 1806 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 KPNA7A9QM74 516 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 F8W810 466 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 NRP1O14786 923 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 MFAP3LO75121 409 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 ITGB1P05556 798 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 P4HA1P13674 534 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 LAG3P18627 525 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 CASP14P31944 242 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 OR1G1P47890 313 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 FXR1P51114 621 aaKnown RBP eCLIP12.46□□□□□ -0.41
FN1-217ENST00000471193 MFAP3P55082 362 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 JAM2P57087 298 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 TNNC1P63316 161 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 RAPGEF1Q13905 1077 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 DCLRE1AQ6PJP8 1040 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 SCARA5Q6ZMJ2 495 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 RRAGAQ7L523 313 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 ENOSF1Q7L5Y1 443 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 PPFIBP1Q86W92 1011 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 DRC7Q8IY82 874 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 UBR7Q8N806 425 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 SPC24Q8NBT2 197 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 RAD9AQ99638 391 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 GPR88Q9GZN0 384 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 SMYD3Q9H7B4 428 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 UBE2TQ9NPD8 197 aaPredicted RBP12.46□□□□□ -0.41
FN1-217ENST00000471193 NLRC4Q9NPP4 1024 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 NXF1Q9UBU9 619 aaKnown RBP12.46□□□□□ -0.41
FN1-217ENST00000471193 CAPN11Q9UMQ6 739 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 INSL6Q9Y581 213 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 SNX9Q9Y5X1 595 aa12.46□□□□□ -0.41
FN1-217ENST00000471193 CARNS1A5YM72 827 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 GOLGA6L6A8MZA4 724 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 F8VZ95 297 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 RNF225M0QZC1 329 aaPredicted RBP12.45□□□□□ -0.42
FN1-217ENST00000471193 TLL1O43897 1013 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 B3GAT3O94766 335 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 GALTP07902 379 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 TPM1P09493 284 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 LINC00271P0C7V0 271 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 ACO1P21399 889 aaKnown RBP12.45□□□□□ -0.42
FN1-217ENST00000471193 BMP8BP34820 402 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 PBX3P40426 434 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 BCAR1P56945 870 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 ZBED6P86452 979 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 ARID5BQ14865 1188 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 SMYD5Q6GMV2 418 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 PDXDC1Q6P996 788 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 CACNA2D4Q7Z3S7 1137 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 LIMS2Q7Z4I7 341 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 TOP6BLQ8N6T0 577 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 COLGALT1Q8NBJ5 622 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 HASPINQ8TF76 798 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 BCL7CQ8WUZ0 217 aaPredicted RBP12.45□□□□□ -0.42
FN1-217ENST00000471193 SHC3Q92529 594 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 JAKMIP2Q96AA8 810 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 SUSD3Q96L08 255 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 STK33Q9BYT3 514 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 SDCBP2Q9H190 292 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 FAM124BQ9H5Z6 455 aaPredicted RBP12.45□□□□□ -0.42
FN1-217ENST00000471193 CYP3A43Q9HB55 503 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 MYO6Q9UM54 1294 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 FAN1Q9Y2M0 1017 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 SCN1AP35498 2009 aa12.45□□□□□ -0.42
FN1-217ENST00000471193 LCHNA4D1U4 455 aa12.44□□□□□ -0.42
FN1-217ENST00000471193 LRRC53A6NM62 1247 aa12.44□□□□□ -0.42
FN1-217ENST00000471193 AKR1B15C9JRZ8 316 aaPredicted RBP12.44□□□□□ -0.42
FN1-217ENST00000471193 M0QZQ0 153 aa12.44□□□□□ -0.42
FN1-217ENST00000471193 CAPN15O75808 1086 aa12.44□□□□□ -0.42
FN1-217ENST00000471193 ALDH2P05091 517 aa12.44□□□□□ -0.42
FN1-217ENST00000471193 BRCC3P46736 316 aa12.44□□□□□ -0.42
FN1-217ENST00000471193 RAP1GAPP47736 663 aa12.44□□□□□ -0.42
FN1-217ENST00000471193 INCA1Q0VD86 236 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms