RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 FAM212AQ96EL1 285 aa15.25■□□□□ 0.03
COMMD3-208ENST00000470045 TMEM206Q9H813 350 aa15.25■□□□□ 0.03
COMMD3-208ENST00000470045 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.25■□□□□ 0.03
COMMD3-208ENST00000470045 IGSF9Q9P2J2 1179 aa15.25■□□□□ 0.03
COMMD3-208ENST00000470045 MUC6Q6W4X9 2439 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 EIF3DO15371 548 aaKnown RBP eCLIP15.24■□□□□ 0.03
COMMD3-208ENST00000470045 CCL16O15467 120 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 XYLBO75191 536 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 PRPF6O94906 941 aaKnown RBP15.24■□□□□ 0.03
COMMD3-208ENST00000470045 IL18RAPO95256 599 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 LDHAP00338 332 aaKnown RBP15.24■□□□□ 0.03
COMMD3-208ENST00000470045 TYMPP19971 482 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 GBP2P32456 591 aaPredicted RBP15.24■□□□□ 0.03
COMMD3-208ENST00000470045 WNT7BP56706 349 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 LILRA4P59901 499 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 ASIC1P78348 528 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 YWHAHQ04917 246 aaPredicted RBP15.24■□□□□ 0.03
COMMD3-208ENST00000470045 STXBP4Q6ZWJ1 553 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 GRASPQ7Z6J2 395 aaPredicted RBP15.24■□□□□ 0.03
COMMD3-208ENST00000470045 TCEAL8Q8IYN2 117 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 ZSWIM2Q8NEG5 633 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 MFSD14AQ96MC6 490 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 PYM1Q9BRP8 204 aaKnown RBP15.24■□□□□ 0.03
COMMD3-208ENST00000470045 CBWD1Q9BRT8 395 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 OXCT2Q9BYC2 517 aaPredicted RBP15.24■□□□□ 0.03
COMMD3-208ENST00000470045 SMOC2Q9H3U7 446 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 KCNK12Q9HB15 430 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 FAM13BQ9NYF5 915 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 MAFFQ9ULX9 164 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 ZDBF2Q9HCK1 2354 aa15.24■□□□□ 0.03
COMMD3-208ENST00000470045 KIAA0391O15091 583 aaKnown RBP15.23■□□□□ 0.03
COMMD3-208ENST00000470045 SPTLC1O15269 473 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 LAMP2P13473 410 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 FSHRP23945 695 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 HOXD13P35453 343 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 NTHL1P78549 312 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 FAM26FQ5R3K3 315 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 UNC13DQ70J99 1090 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 GET4Q7L5D6 327 aaPredicted RBP15.23■□□□□ 0.03
COMMD3-208ENST00000470045 SYCP3Q8IZU3 236 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 FBXL6Q8N531 539 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 LEO1Q8WVC0 666 aaPredicted RBP15.23■□□□□ 0.03
COMMD3-208ENST00000470045 HPS3Q969F9 1004 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 PBXIP1Q96AQ6 731 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 SAAL1Q96ER3 474 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 FAM213AQ9BRX8 229 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 AFF4Q9UHB7 1163 aaKnown RBP15.23■□□□□ 0.03
COMMD3-208ENST00000470045 KCNH3Q9ULD8 1083 aa15.23■□□□□ 0.03
COMMD3-208ENST00000470045 ZFP37Q9Y6Q3 630 aaPredicted RBP15.23■□□□□ 0.03
COMMD3-208ENST00000470045 UBE4BO95155 1302 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 ANHXE9PGG2 379 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 ACTN4O43707 911 aaKnown RBP15.22■□□□□ 0.03
COMMD3-208ENST00000470045 EXTL3O43909 919 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 SEC24AO95486 1093 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 CYP11A1P05108 521 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 KRT85P78386 507 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 TDGQ13569 410 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 DSTYKQ6XUX3 929 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 ZNF507Q8TCN5 953 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 NXPE3Q969Y0 559 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 CHAMP1Q96JM3 812 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 SENP8Q96LD8 212 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 KCNH6Q9H252 994 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 AVENQ9NQS1 362 aaPredicted RBP15.22■□□□□ 0.03
COMMD3-208ENST00000470045 HCFC1R1Q9NWW0 138 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 DPP3Q9NY33 737 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 RBAKQ9NYW8 714 aaPredicted RBP15.22■□□□□ 0.03
COMMD3-208ENST00000470045 DNMT3BQ9UBC3 853 aaKnown RBP15.22■□□□□ 0.03
COMMD3-208ENST00000470045 DUSP12Q9UNI6 340 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 TIMM13Q9Y5L4 95 aaPredicted RBP15.22■□□□□ 0.03
COMMD3-208ENST00000470045 INSL5Q9Y5Q6 135 aa15.22■□□□□ 0.03
COMMD3-208ENST00000470045 PVALEFA0A1B0GWK0 134 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 OR6C75A6NL08 312 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 VNN2O95498 520 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 SLFN14P0C7P3 912 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 ODC1P11926 461 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 CMA1P23946 247 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 CASP1P29466 404 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 ELF1P32519 619 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 ARPP19P56211 112 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 HTR4Q13639 388 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 ARMCX5Q6P1M9 558 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 RNF19BQ6ZMZ0 732 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 GPD1LQ8N335 351 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 CXorf38Q8TB03 319 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 BORCS6Q96GS4 357 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 SPATA32Q96LK8 384 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 BLZF1Q9H2G9 400 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 CDH7Q9ULB5 785 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 POLIQ9UNA4 740 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 HPSEQ9Y251 543 aa15.21■□□□□ 0.03
COMMD3-208ENST00000470045 FAM237AA0A1B0GTK4 181 aa15.2■□□□□ 0.02
COMMD3-208ENST00000470045 GOLGA8IPA6NC78 632 aa15.2■□□□□ 0.02
COMMD3-208ENST00000470045 GOLGA8JA6NMD2 632 aa15.2■□□□□ 0.02
COMMD3-208ENST00000470045 PRRG1O14668 218 aa15.2■□□□□ 0.02
COMMD3-208ENST00000470045 TGFB1I1O43294 461 aa15.2■□□□□ 0.02
COMMD3-208ENST00000470045 PDGFBP01127 241 aaPredicted RBP15.2■□□□□ 0.02
COMMD3-208ENST00000470045 LRG1P02750 347 aa15.2■□□□□ 0.02
COMMD3-208ENST00000470045 CPB1P15086 417 aa15.2■□□□□ 0.02
COMMD3-208ENST00000470045 PFKFB1P16118 471 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms