RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 ACO1P21399 889 aaKnown RBP18.95■□□□□ 0.62
MCF2L-221ENST00000469415 RPS12P25398 132 aaKnown RBP18.95■□□□□ 0.62
MCF2L-221ENST00000469415 TMEM192Q8IY95 271 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 DDX27Q96GQ7 796 aaKnown RBP18.95■□□□□ 0.62
MCF2L-221ENST00000469415 OSBPL8Q9BZF1 889 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 FHDC1Q9C0D6 1143 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-221ENST00000469415 SOWAHBA6NEL2 793 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 IRF6O14896 467 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 CLTAP09496 248 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 HSPA6P17066 643 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 CLCN3P51790 818 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 SNRPFP62306 86 aaKnown RBP18.95■□□□□ 0.62
MCF2L-221ENST00000469415 TRPC3Q13507 836 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 FBXO16Q8IX29 292 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-221ENST00000469415 LRRC34Q8IZ02 419 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 ABRAQ8N0Z2 381 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 RDM1Q8NG50 284 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 AAASQ9NRG9 546 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 POLIQ9UNA4 740 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 NOMO3P69849 1222 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 DHX33Q9H6R0 707 aaKnown RBP18.94■□□□□ 0.62
MCF2L-221ENST00000469415 IVNS1ABPQ9Y6Y0 642 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 LRRD1A4D1F6 860 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 C19orf81C9J6K1 198 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 FSCN2O14926 492 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 BANF1O75531 89 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 POTEJP0CG39 1038 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 MKRN3Q13064 507 aaKnown RBP18.94■□□□□ 0.62
MCF2L-221ENST00000469415 AUHQ13825 339 aaKnown RBP18.94■□□□□ 0.62
MCF2L-221ENST00000469415 C15orf39Q6ZRI6 1047 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 CACNA2D3Q8IZS8 1091 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 EMC1Q8N766 993 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 ART4Q93070 314 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 HVCN1Q96D96 273 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 DCLK3Q9C098 648 aa18.94■□□□□ 0.62
MCF2L-221ENST00000469415 FARP2O94887 1054 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-221ENST00000469415 PROSCO94903 275 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 GAS8O95995 478 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 KRT1P04264 644 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 EIF3BP55884 814 aaKnown RBP18.93■□□□□ 0.62
MCF2L-221ENST00000469415 BYSLQ13895 437 aaKnown RBP18.93■□□□□ 0.62
MCF2L-221ENST00000469415 GPAT2Q6NUI2 795 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 MON1BQ7L1V2 547 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 ARHGEF2Q92974 986 aaKnown RBP18.93■□□□□ 0.62
MCF2L-221ENST00000469415 PCSK1NQ9UHG2 260 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 MAFBQ9Y5Q3 323 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-221ENST00000469415 KIAA1217Q5T5P2 1943 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 A0A0B4J269 797 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 USP2O75604 605 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-221ENST00000469415 GH1P01241 217 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 NAMPTP43490 491 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 MFSD7Q6UXD7 560 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-221ENST00000469415 SENP7Q9BQF6 1050 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 JPH2Q9BR39 696 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-221ENST00000469415 NRBP2Q9NSY0 501 aa18.93■□□□□ 0.62
MCF2L-221ENST00000469415 LOC102724159A0A0B4J2E5 919 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 MTA2O94776 668 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 RARGP13631 454 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 NRLP54845 237 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 PWP2Q15269 919 aaKnown RBP18.92■□□□□ 0.62
MCF2L-221ENST00000469415 P3H1Q32P28 736 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 GKAP1Q5VSY0 366 aaPredicted RBP18.92■□□□□ 0.62
MCF2L-221ENST00000469415 EEF1DP3Q658K8 133 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 XRRA1Q6P2D8 792 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 TFAP2BQ92481 460 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 PDGFCQ9NRA1 345 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 DNPEPQ9ULA0 475 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 POC1B-GALNT4F8VUJ3 575 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 TP73O15350 636 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 IZUMO3Q5VZ72 239 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 MICALCLQ6ZW33 695 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 SRRM1Q8IYB3 904 aaKnown RBP18.92■□□□□ 0.62
MCF2L-221ENST00000469415 CYP4X1Q8N118 509 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 TLCD1Q96CP7 247 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 ADAM7Q9H2U9 754 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 LRRC19Q9H756 370 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 CISHQ9NSE2 258 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 PARP2Q9UGN5 583 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 ATP8B3O60423 1300 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 FZD9O00144 591 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 TMEM191BP0C7N4 346 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 FDX1P10109 184 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 ARL2P36404 184 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 CENPCQ03188 943 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 EXOC3L1Q86VI1 746 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 RHOT1Q8IXI2 618 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 LRRN4Q8WUT4 740 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 CHMP6Q96FZ7 201 aa18.92■□□□□ 0.62
MCF2L-221ENST00000469415 A6NNZ2 444 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 BPIFB4P59827 614 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 OGDHQ02218 1023 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 Q3C1V9 767 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 TUBB8Q3ZCM7 444 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 FAM133BQ5BKY9 247 aaKnown RBP18.91■□□□□ 0.62
MCF2L-221ENST00000469415 SNF8Q96H20 258 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 OSBPL7Q9BZF2 842 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 VPS33BQ9H267 617 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 SYNCQ9H7C4 482 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.91■□□□□ 0.625e-6■■■□□ 17.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms