RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 A0A1B0GUA9 196 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 MUTP22033 750 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 ATP5DP30049 168 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 ARSEP51690 589 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 ANKRD20A2Q5SQ80 823 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 ANKRD20A1Q5TYW2 823 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 ANKRD20A3Q5VUR7 823 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 TAS1R3Q7RTX0 852 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 ZBED8Q8IZ13 594 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 TMEM121Q9BTD3 319 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 TRABDQ9H4I3 376 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 UBIAD1Q9Y5Z9 338 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 F8VP50 259 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 UNC5CO95185 931 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 HLA-DRAP01903 254 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 CA4P22748 312 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 KLRC2P26717 231 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 EPHB2P29323 1055 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 PLCB3Q01970 1234 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 STRN3Q13033 797 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 TDRD10Q5VZ19 366 aaKnown RBP12.8□□□□□ -0.36
VARS2-205ENST00000469358 MON1BQ7L1V2 547 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 TTC8Q8TAM2 541 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 DCTN4Q9UJW0 460 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.8□□□□□ -0.36
VARS2-205ENST00000469358 PCDHB4Q9Y5E5 795 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 SPDYE2BA6NHP3 402 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 SPDYE6P0CI01 402 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 ERFP50548 548 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 TRABD2AQ86V40 505 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 MICAL1Q8TDZ2 1067 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 GRK7Q8WTQ7 553 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 MFSD14AQ96MC6 490 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 MAK16Q9BXY0 300 aaKnown RBP12.8□□□□□ -0.36
VARS2-205ENST00000469358 EURLQ9NYK6 297 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 TMOD2Q9NZR1 351 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 IVNS1ABPQ9Y6Y0 642 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 ZNF541Q9H0D2 1346 aa12.8□□□□□ -0.36
VARS2-205ENST00000469358 ASMTLO95671 621 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 ICAM1P05362 532 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 MAPTP10636 758 aaKnown RBP12.79□□□□□ -0.36
VARS2-205ENST00000469358 PEX19P40855 299 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 PIK3CAP42336 1068 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 ABL2P42684 1182 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 PSMC5P62195 406 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 IL9RQ01113 521 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 RPAINQ86UA6 219 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 TMEM130Q8N3G9 435 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 CCDC89Q8N998 374 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 RMDN3Q96TC7 470 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 MRIQ9BWK5 157 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 SLC5A4Q9NY91 659 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 HERC5Q9UII4 1024 aaKnown RBP12.79□□□□□ -0.36
VARS2-205ENST00000469358 ENTPD5O75356 428 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 PSEN1P49768 467 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 LACTBP83111 547 aaPredicted RBP12.79□□□□□ -0.36
VARS2-205ENST00000469358 ALCAMQ13740 583 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 PGM5Q15124 567 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 SWSAP1Q6NVH7 229 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 NLGN1Q8N2Q7 840 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 HAPLN2Q9GZV7 340 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 ANKFY1Q9P2R3 1169 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 LGALS13Q9UHV8 139 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 RIPK3Q9Y572 518 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 CNTNAP1P78357 1384 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 C2orf71A6NGG8 1288 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 VNN1O95497 513 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 T-ENOLP0DO92 83 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 ATP2A2P16615 1042 aaKnown RBP12.79□□□□□ -0.36
VARS2-205ENST00000469358 CCND1P24385 295 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 SSTR1P30872 391 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 PTGER2P43116 358 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 NFX1Q12986 1120 aaKnown RBP12.79□□□□□ -0.36
VARS2-205ENST00000469358 CRYMQ14894 314 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 CCNG2Q16589 344 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 SMTNL2Q2TAL5 461 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 BRDTQ58F21 947 aaPredicted RBP12.79□□□□□ -0.36
VARS2-205ENST00000469358 RHOT1Q8IXI2 618 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 GPD1LQ8N335 351 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 TMEM143Q96AN5 459 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 SPDL1Q96EA4 605 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 IFT74Q96LB3 600 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 NPHS2Q9NP85 383 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 PCDHB2Q9Y5E7 798 aa12.79□□□□□ -0.36
VARS2-205ENST00000469358 KRT1P04264 644 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 GNA15P30679 374 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 ATP11AP98196 1134 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 OGDHQ02218 1023 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 PLEKHG4Q58EX7 1191 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 C4orf19Q8IY42 314 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 ANKRD35Q8N283 1001 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 OR5B17Q8NGF7 314 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 PRR11Q96HE9 360 aaPredicted RBP12.78□□□□□ -0.36
VARS2-205ENST00000469358 LRRC37BQ96QE4 947 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 XPNPEP1Q9NQW7 623 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 FEM1BQ9UK73 627 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 EXOC7Q9UPT5 735 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 CCNB1P14635 433 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 NOMO3P69849 1222 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms