RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 PRICKLE2Q7Z3G6 844 aa11.73□□□□□ -0.53
TRAIP-202ENST00000469027 TCEAL8Q8IYN2 117 aa11.73□□□□□ -0.53
TRAIP-202ENST00000469027 GALNT15Q8N3T1 639 aa11.73□□□□□ -0.53
TRAIP-202ENST00000469027 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
TRAIP-202ENST00000469027 RNF149Q8NC42 400 aa11.73□□□□□ -0.53
TRAIP-202ENST00000469027 BPIFB1Q8TDL5 484 aa11.73□□□□□ -0.53
TRAIP-202ENST00000469027 PSPC1Q8WXF1 523 aaKnown RBP11.73□□□□□ -0.53
TRAIP-202ENST00000469027 DDX27Q96GQ7 796 aaKnown RBP11.73□□□□□ -0.53
TRAIP-202ENST00000469027 LRRC3BQ96PB8 259 aa11.73□□□□□ -0.53
TRAIP-202ENST00000469027 NIFKQ9BYG3 293 aaKnown RBP11.73□□□□□ -0.53
TRAIP-202ENST00000469027 RIC8AQ9NPQ8 531 aa11.73□□□□□ -0.53
TRAIP-202ENST00000469027 CEP72Q9P209 647 aa11.73□□□□□ -0.53
TRAIP-202ENST00000469027 NXF1Q9UBU9 619 aaKnown RBP11.73□□□□□ -0.53
TRAIP-202ENST00000469027 CREBBPQ92793 2442 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 MUC22E2RYF6 1773 aaPredicted RBP11.72□□□□□ -0.53
TRAIP-202ENST00000469027 ARHGAP33O14559 1287 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 SYPP08247 313 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 SERPINF2P08697 491 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 CXADRP78310 365 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 AMPD2Q01433 879 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
TRAIP-202ENST00000469027 SLC14A1Q13336 389 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 AP3B2Q13367 1082 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 C2orf27AQ580R0 203 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 TYW1BQ6NUM6 668 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 MDGA1Q8NFP4 955 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 PRPF31Q8WWY3 499 aaKnown RBP11.72□□□□□ -0.53
TRAIP-202ENST00000469027 SLC7A3Q8WY07 619 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 EXOC4Q96A65 974 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 CNOT6LQ96LI5 555 aaKnown RBP11.72□□□□□ -0.53
TRAIP-202ENST00000469027 RWDD1Q9H446 243 aaPredicted RBP11.72□□□□□ -0.53
TRAIP-202ENST00000469027 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
TRAIP-202ENST00000469027 DNAAF2Q9NVR5 837 aaKnown RBP11.72□□□□□ -0.53
TRAIP-202ENST00000469027 KCNK4Q9NYG8 393 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 PILRBQ9UKJ0 227 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 TPCN1Q9ULQ1 816 aa11.72□□□□□ -0.53
TRAIP-202ENST00000469027 I3L4J1 428 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 INO80B-WBP1J3KQ70 363 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 SH2B2O14492 632 aaPredicted RBP11.71□□□□□ -0.53
TRAIP-202ENST00000469027 B3GAT3O94766 335 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 ABLIM3O94929 683 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 THP07101 528 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 HLA-EP13747 358 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 SFNP31947 248 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 HOXD12P35452 270 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 MCM2P49736 904 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 JAK3P52333 1124 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 LAMTOR4Q0VGL1 99 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 RUNX3Q13761 415 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 JAKMIP3Q5VZ66 844 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 PLA2G4FQ68DD2 849 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 WWC2Q6AWC2 1192 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 NFXL1Q6ZNB6 911 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 TMTC3Q6ZXV5 915 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 RABEPKQ7Z6M1 372 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 CDR2LQ86X02 465 aaPredicted RBP11.71□□□□□ -0.53
TRAIP-202ENST00000469027 RAB11FIP4Q86YS3 637 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 FMNL3Q8IVF7 1028 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 DAGLBQ8NCG7 672 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 SETD7Q8WTS6 366 aaKnown RBP11.71□□□□□ -0.53
TRAIP-202ENST00000469027 TMEM143Q96AN5 459 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 CHFRQ96EP1 664 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 PNMA5Q96PV4 448 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 CEP89Q96ST8 783 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 P2RY13Q9BPV8 354 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 EBF3Q9H4W6 596 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 FBRSL1Q9HCM7 1045 aaKnown RBP11.71□□□□□ -0.53
TRAIP-202ENST00000469027 GKN1Q9NS71 199 aa11.71□□□□□ -0.53
TRAIP-202ENST00000469027 TSC2P49815 1807 aa11.71□□□□□ -0.54
TRAIP-202ENST00000469027 TNRC6BQ9UPQ9 1833 aaKnown RBP11.71□□□□□ -0.54
TRAIP-202ENST00000469027 TRAPPC3O43617 180 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 PRC1O43663 620 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 GAS7O60861 476 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 ALDH1A2O94788 518 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 CHMLP26374 656 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 GALK1P51570 392 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 EPHA5P54756 1037 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 SEMG2Q02383 582 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 ARHGAP15Q53QZ3 475 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 CCDC157Q569K6 752 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 GPR158Q5T848 1215 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 TTC22Q5TAA0 569 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 TRIM68Q6AZZ1 485 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 SLC8B1Q6J4K2 584 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 MIER3Q7Z3K6 550 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 RASSF3Q86WH2 238 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 BAP1Q92560 729 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 FNBP1Q96RU3 617 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 MTA3Q9BTC8 594 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 TRIM4Q9C037 500 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 SEMA4CQ9C0C4 833 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 ATXN3LQ9H3M9 355 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 CAPN10Q9HC96 672 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 OBP2AQ9NY56 170 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 KIAA1522Q9P206 1035 aaPredicted RBP11.7□□□□□ -0.54
TRAIP-202ENST00000469027 BCCIPQ9P287 314 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAIP-202ENST00000469027 ATMQ13315 3056 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 MGAQ8IWI9 3026 aa11.7□□□□□ -0.54
TRAIP-202ENST00000469027 COL5A1P20908 1838 aaPredicted RBP11.7□□□□□ -0.54
TRAIP-202ENST00000469027 CNTNAP5Q8WYK1 1306 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms