RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ALOX15P16050 662 aaPredicted RBP6.37□□□□□ -1.39
LSM5-209ENST00000468872 PEX2P28328 305 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 CACNB3P54284 484 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 CTXN1P60606 82 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 GPSM2P81274 684 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 SP140Q13342 867 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 MFSD14BQ5SR56 506 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 APOA5Q6Q788 366 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 LRRC55Q6ZSA7 311 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 SH2D3CQ8N5H7 860 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 PROKR1Q8TCW9 393 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 PARD3BQ8TEW8 1205 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 LRTOMTQ8WZ04 291 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 FAM167AQ96KS9 214 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 STRBPQ96SI9 672 aaKnown RBP6.37□□□□□ -1.39
LSM5-209ENST00000468872 NDC1Q9BTX1 674 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 APOL5Q9BWW9 433 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 C22orf23Q9BZE7 217 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 ZNF768Q9H5H4 540 aaKnown RBP6.37□□□□□ -1.39
LSM5-209ENST00000468872 ZMAT3Q9HA38 289 aaKnown RBP6.37□□□□□ -1.39
LSM5-209ENST00000468872 PNPOQ9NVS9 261 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 PHTF1Q9UMS5 762 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 CFAP69A5D8W1 941 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 AHRRA9YTQ3 701 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 PPFIA4O75335 1185 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 ABHD16AO95870 558 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 IL2RBP14784 551 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 ZFP36P26651 326 aaKnown RBP6.36□□□□□ -1.39
LSM5-209ENST00000468872 APOBEC3AP31941 199 aaPredicted RBP6.36□□□□□ -1.39
LSM5-209ENST00000468872 ALDH1A3P47895 512 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 FSTL1Q12841 308 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 FGL2Q14314 439 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 LY6G5CQ5SRR4 150 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 AFMIDQ63HM1 303 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 PDZD4Q76G19 769 aaPredicted RBP6.36□□□□□ -1.39
LSM5-209ENST00000468872 GPRIN1Q7Z2K8 1008 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 C11orf96Q7Z7L8 435 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 VRK3Q8IV63 474 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 RUVBL1Q9Y265 456 aaKnown RBP6.36□□□□□ -1.39
LSM5-209ENST00000468872 HS3ST4Q9Y661 456 aa6.36□□□□□ -1.39
LSM5-209ENST00000468872 PRR5-ARHGAP8B1AHC4 643 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 FLT3LGP49771 235 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 FAM189BP81408 668 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 APBA1Q02410 837 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 COL10A1Q03692 680 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 FLYWCH1Q4VC44 716 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 PLXDC1Q8IUK5 500 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 CELF5Q8N6W0 485 aaKnown RBP6.35□□□□□ -1.39
LSM5-209ENST00000468872 MTFMTQ96DP5 389 aaKnown RBP6.35□□□□□ -1.39
LSM5-209ENST00000468872 SLC46A2Q9BY10 475 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 KLHL11Q9NVR0 708 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 MOCS1Q9NZB8 636 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 FEZ2Q9UHY8 353 aaPredicted RBP6.35□□□□□ -1.39
LSM5-209ENST00000468872 RIPOR2Q9Y4F9 1068 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 COMMD10Q9Y6G5 202 aa6.35□□□□□ -1.39
LSM5-209ENST00000468872 F2RL2O00254 374 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 LEFTY2O00292 366 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 SMARCA1P28370 1054 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 PRDX5P30044 214 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 ALDH5A1P51649 535 aaPredicted RBP6.34□□□□□ -1.39
LSM5-209ENST00000468872 NANOS3P60323 173 aaKnown RBP6.34□□□□□ -1.39
LSM5-209ENST00000468872 OS9Q13438 667 aaPredicted RBP6.34□□□□□ -1.39
LSM5-209ENST00000468872 POLD3Q15054 466 aaPredicted RBP6.34□□□□□ -1.39
LSM5-209ENST00000468872 PTPAQ15257 358 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 CSRP2Q16527 193 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 TIGD2Q4W5G0 525 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 FAM47AQ5JRC9 791 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 KCNV1Q6PIU1 500 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 PPP1R3BQ86XI6 285 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 FAM90A1Q86YD7 464 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 KRT78Q8N1N4 520 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 IL31RAQ8NI17 732 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 PSMD1Q99460 953 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 MYOCQ99972 504 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 ELAC2Q9BQ52 826 aaKnown RBP6.34□□□□□ -1.39
LSM5-209ENST00000468872 C1orf43Q9BWL3 253 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 WDCPQ9H6R7 721 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 SPON1Q9HCB6 807 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 SLC23A1Q9UHI7 598 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 CLCA2Q9UQC9 943 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 PCDHA1Q9Y5I3 950 aa6.34□□□□□ -1.39
LSM5-209ENST00000468872 CXorf49A8MYA2 514 aaPredicted RBP6.33□□□□□ -1.4
LSM5-209ENST00000468872 PHGDHO43175 533 aaKnown RBP6.33□□□□□ -1.4
LSM5-209ENST00000468872 FRS3O43559 492 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 MGEA5O60502 916 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 LDHAP00338 332 aaKnown RBP6.33□□□□□ -1.4
LSM5-209ENST00000468872 CD1AP06126 327 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 SBK3P0C264 359 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 FTH1P19P0C7X4 201 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 RAP2AP10114 183 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 MYF5P13349 255 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 LAG3P18627 525 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 SERPINB3P29508 390 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 HTR3AP46098 478 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 LONRF1Q17RB8 773 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 ANKS6Q68DC2 871 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 OTUD7BQ6GQQ9 843 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 DRICH1Q6PGQ1 229 aaPredicted RBP6.33□□□□□ -1.4
LSM5-209ENST00000468872 GDF7Q7Z4P5 450 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 MORC1Q86VD1 984 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms