RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ITGB1P05556 798 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 FANCCQ00597 558 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 WDR44Q5JSH3 913 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 FUT10Q6P4F1 479 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 CD300LGQ6UXG3 332 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 GBP6Q6ZN66 633 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 KLHL23Q8NBE8 558 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 GCNT4Q9P109 453 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 PUF60Q9UHX1 559 aaKnown RBP16.35■□□□□ 0.21
SNIP1-202ENST00000468040 MTUS1Q9ULD2 1270 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 SPTLC1O15269 473 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 TPM3P06753 285 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 P4HA1P13674 534 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 TNNC1P63316 161 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 NOP14P78316 857 aaKnown RBP16.34■□□□□ 0.21
SNIP1-202ENST00000468040 UBE3AQ05086 875 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 EXOC3L4Q17RC7 722 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 TIGD5Q53EQ6 642 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 ZNF667Q5HYK9 610 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 SCARA3Q6AZY7 606 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 DSTYKQ6XUX3 929 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 DDX53Q86TM3 631 aaKnown RBP16.34■□□□□ 0.21
SNIP1-202ENST00000468040 FBXO22Q8NEZ5 403 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 BCL7CQ8WUZ0 217 aaPredicted RBP16.34■□□□□ 0.21
SNIP1-202ENST00000468040 SEMA4DQ92854 862 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 FAXDC2Q96IV6 333 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 SUSD3Q96L08 255 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 GDAP2Q9NXN4 497 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 LZTS1Q9Y250 596 aa16.34■□□□□ 0.21
SNIP1-202ENST00000468040 A0A1B0GTH6 734 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 M0QZQ0 153 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 SYN3O14994 580 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 EFEMP2O95967 443 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 ODC1P11926 461 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 IGFBP6P24592 240 aaPredicted RBP16.33■□□□□ 0.2
SNIP1-202ENST00000468040 BRCC3P46736 316 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 UBASH3AP57075 661 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 UBXN1Q04323 297 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 UVSSAQ2YD98 709 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 WDR72Q3MJ13 1102 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.33■□□□□ 0.2
SNIP1-202ENST00000468040 EHBP1Q8NDI1 1231 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 ARNTL2Q8WYA1 636 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 SENP8Q96LD8 212 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 NT5C1BQ96P26 610 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 CRACR2AQ9BSW2 395 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 PI4K2AQ9BTU6 479 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 GPR62Q9BZJ7 368 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 INTS2Q9H0H0 1204 aaKnown RBP16.33■□□□□ 0.2
SNIP1-202ENST00000468040 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
SNIP1-202ENST00000468040 NXF1Q9UBU9 619 aaKnown RBP16.33■□□□□ 0.2
SNIP1-202ENST00000468040 DSEQ9UL01 958 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 PCDHB8Q9UN66 801 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 SNX9Q9Y5X1 595 aa16.33■□□□□ 0.2
SNIP1-202ENST00000468040 H3BNC9 293 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 CYB561D2O14569 222 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 HUS1O60921 280 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 SOD2P04179 222 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 SCN1AP35498 2009 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 BMS1Q14692 1282 aaKnown RBP16.32■□□□□ 0.2
SNIP1-202ENST00000468040 FAM171A1Q5VUB5 890 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 TRIM65Q6PJ69 517 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 DPH6Q7L8W6 267 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 SPRED2Q7Z698 418 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
SNIP1-202ENST00000468040 TOP6BLQ8N6T0 577 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 APPL2Q8NEU8 664 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 LMO3Q8TAP4 145 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 FAM81BQ96LP2 452 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 HERC2P3Q9BVR0 1158 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 NIF3L1Q9GZT8 377 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 ZNF576Q9H609 170 aa16.32■□□□□ 0.2
SNIP1-202ENST00000468040 I3L4J1 428 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 CBFA2T2O43439 604 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 FAM163BP0C2L3 166 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 TYMPP19971 482 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 FGFR3P22607 806 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 PON1P27169 355 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 GPM6BQ13491 265 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 NR1I3Q14994 352 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 USP41Q3LFD5 358 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 SPOPLQ6IQ16 392 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 KIAA1841Q6NSI8 718 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 SARM1Q6SZW1 724 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 METTL23Q86XA0 190 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 VPS52Q8N1B4 723 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 TMEM86AQ8N2M4 240 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 SPATA18Q8TC71 538 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 SPPL3Q8TCT6 385 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 NAP1L5Q96NT1 182 aaPredicted RBP16.31■□□□□ 0.2
SNIP1-202ENST00000468040 ERGIC2Q96RQ1 377 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 MMS19Q96T76 1030 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 TTPALQ9BTX7 342 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 VN1R3Q9BXE9 311 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 CERS4Q9HA82 394 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 APOBEC3GQ9HC16 384 aaKnown RBP16.31■□□□□ 0.2
SNIP1-202ENST00000468040 IFNKQ9P0W0 207 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 SSX2IPQ9Y2D8 614 aa16.31■□□□□ 0.2
SNIP1-202ENST00000468040 LRRN2O75325 713 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 CYP11A1P05108 521 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms