RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 SLC26A4O43511 780 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 KRT18P05783 430 aaKnown RBP22.91■■□□□ 1.26
COL9A3-207ENST00000467819 OR4Q2P0C623 313 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 MYL4P12829 197 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 PLCG1P19174 1290 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 TARSP26639 723 aaKnown RBP22.91■■□□□ 1.26
COL9A3-207ENST00000467819 GRIN1Q05586 938 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 MCM6Q14566 821 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 KARSQ15046 597 aaKnown RBP22.91■■□□□ 1.26
COL9A3-207ENST00000467819 ZBTB6Q15916 424 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 ENOX2Q16206 610 aaKnown RBP22.91■■□□□ 1.26
COL9A3-207ENST00000467819 DSTYKQ6XUX3 929 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 FAM212AQ96EL1 285 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 PGLYRP2Q96PD5 576 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 OSBPL6Q9BZF3 934 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 RPF1Q9H9Y2 349 aaKnown RBP22.91■■□□□ 1.26
COL9A3-207ENST00000467819 PARVGQ9HBI0 331 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 BLOC1S4Q9NUP1 217 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 YIPF1Q9Y548 306 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 SCN1AP35498 2009 aa22.91■■□□□ 1.26
COL9A3-207ENST00000467819 OGTO15294 1046 aa22.9■■□□□ 1.26
COL9A3-207ENST00000467819 XPOTO43592 962 aaKnown RBP22.9■■□□□ 1.26
COL9A3-207ENST00000467819 GJA1P17302 382 aa22.9■■□□□ 1.26
COL9A3-207ENST00000467819 CYP3A5P20815 502 aa22.9■■□□□ 1.26
COL9A3-207ENST00000467819 MCM2P49736 904 aa22.9■■□□□ 1.26
COL9A3-207ENST00000467819 KYAT1Q16773 422 aa22.9■■□□□ 1.26
COL9A3-207ENST00000467819 USP37Q86T82 979 aa22.9■■□□□ 1.26
COL9A3-207ENST00000467819 ASB16Q96NS5 453 aa22.9■■□□□ 1.26
COL9A3-207ENST00000467819 BRD9Q9H8M2 597 aa22.9■■□□□ 1.26
COL9A3-207ENST00000467819 ASAH2Q9NR71 780 aa22.9■■□□□ 1.26
COL9A3-207ENST00000467819 MAFFQ9ULX9 164 aa22.9■■□□□ 1.26
COL9A3-207ENST00000467819 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.9■■□□□ 1.26
COL9A3-207ENST00000467819 PPEF2O14830 753 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 FAM189A1O60320 539 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 MICAL2O94851 1124 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 OAZ2O95190 189 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 PIGRP01833 764 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 AARSP49588 968 aaKnown RBP eCLIP22.89■■□□□ 1.25
COL9A3-207ENST00000467819 ZNF131P52739 623 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 ZNF852Q6ZMS4 543 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 RAD54LQ92698 747 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 DNASE1L2Q92874 299 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 KCNN1Q92952 543 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 ZSWIM3Q96MP5 696 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 HINFPQ9BQA5 517 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 MSTO1Q9BUK6 570 aa22.89■■□□□ 1.25
COL9A3-207ENST00000467819 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-207ENST00000467819 DMXL1Q9Y485 3027 aa22.88■■□□□ 1.25
COL9A3-207ENST00000467819 TRAK2O60296 914 aa22.88■■□□□ 1.25
COL9A3-207ENST00000467819 TBCAO75347 108 aaKnown RBP22.88■■□□□ 1.25
COL9A3-207ENST00000467819 MOSPD3O75425 235 aa22.88■■□□□ 1.25
COL9A3-207ENST00000467819 VNN2O95498 520 aa22.88■■□□□ 1.25
COL9A3-207ENST00000467819 BMP15O95972 392 aa22.88■■□□□ 1.25
COL9A3-207ENST00000467819 LONP1P36776 959 aaKnown RBP22.88■■□□□ 1.25
COL9A3-207ENST00000467819 ID4P47928 161 aa22.88■■□□□ 1.25
COL9A3-207ENST00000467819 CSTF1Q05048 431 aaKnown RBP22.88■■□□□ 1.25
COL9A3-207ENST00000467819 JADE1Q6IE81 842 aa22.88■■□□□ 1.25
COL9A3-207ENST00000467819 SLC39A4Q6P5W5 647 aa22.88■■□□□ 1.25
COL9A3-207ENST00000467819 BEST2Q8NFU1 509 aa22.88■■□□□ 1.25
COL9A3-207ENST00000467819 SMARCD2Q92925 531 aa22.88■■□□□ 1.25
COL9A3-207ENST00000467819 TRMT61BQ9BVS5 477 aaKnown RBP22.88■■□□□ 1.25
COL9A3-207ENST00000467819 A0A0B4J269 797 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 NMT1P30419 496 aaKnown RBP22.87■■□□□ 1.25
COL9A3-207ENST00000467819 MAGEA9P43362 315 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 EPHA5P54756 1037 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 DUSP4Q13115 394 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 SF3A1Q15459 793 aaKnown RBP22.87■■□□□ 1.25
COL9A3-207ENST00000467819 TEAD2Q15562 447 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 OVOS1Q6IE37 1185 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 VITQ6UXI7 678 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 BRAPQ7Z569 592 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 LEMD2Q8NC56 503 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 ZSCAN18Q8TBC5 510 aaPredicted RBP22.87■■□□□ 1.25
COL9A3-207ENST00000467819 NELL2Q99435 816 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 OXCT2Q9BYC2 517 aaPredicted RBP22.87■■□□□ 1.25
COL9A3-207ENST00000467819 CRISPLD1Q9H336 500 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 SLITRK6Q9H5Y7 841 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 FBXO4Q9UKT5 387 aa22.87■■□□□ 1.25
COL9A3-207ENST00000467819 NDRG2Q9UN36 371 aaKnown RBP22.87■■□□□ 1.25
COL9A3-207ENST00000467819 MRPS17Q9Y2R5 130 aaKnown RBP22.87■■□□□ 1.25
COL9A3-207ENST00000467819 GPR179Q6PRD1 2367 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 NUP210Q8TEM1 1887 aaPredicted RBP22.86■■□□□ 1.25
COL9A3-207ENST00000467819 OR6C75A6NL08 312 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 NCAM2O15394 837 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 KINO60870 393 aaKnown RBP22.86■■□□□ 1.25
COL9A3-207ENST00000467819 SCP2P22307 547 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 GDI1P31150 447 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 VIPR2P41587 438 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 SPATA1Q5VX52 437 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 MAP4K3Q8IVH8 894 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 KIAA2013Q8IYS2 634 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 SHKBP1Q8TBC3 707 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 LARP4BQ92615 738 aaKnown RBP22.86■■□□□ 1.25
COL9A3-207ENST00000467819 CLDN23Q96B33 292 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 FIZ1Q96SL8 496 aa22.86■■□□□ 1.25
COL9A3-207ENST00000467819 CPSF3Q9UKF6 684 aaKnown RBP22.86■■□□□ 1.25
COL9A3-207ENST00000467819 NCANO14594 1321 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 VPS37CA5D8V6 355 aaPredicted RBP22.85■■□□□ 1.25
COL9A3-207ENST00000467819 SHISA7A6NL88 538 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 ANKRD63C9JTQ0 380 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms