RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 CUEDC2Q9H467 287 aa11.26□□□□□ -0.61
SSR3-205ENST00000467789 AVENQ9NQS1 362 aaPredicted RBP11.26□□□□□ -0.61
SSR3-205ENST00000467789 WNT16Q9UBV4 365 aa11.26□□□□□ -0.61
SSR3-205ENST00000467789 CDH7Q9ULB5 785 aa11.26□□□□□ -0.61
SSR3-205ENST00000467789 EXOC7Q9UPT5 735 aa11.26□□□□□ -0.61
SSR3-205ENST00000467789 LACTBL1A8MY62 500 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 ANHXE9PGG2 379 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 I3L4J1 428 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 OAZ2O95190 189 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 YEATS4O95619 227 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 LRG1P02750 347 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 HSP90AA1P07900 732 aaKnown RBP11.25□□□□□ -0.61
SSR3-205ENST00000467789 MYBP10242 640 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 SRFP11831 508 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 NMT1P30419 496 aaKnown RBP11.25□□□□□ -0.61
SSR3-205ENST00000467789 TNFSF9P41273 254 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 AARSP49588 968 aaKnown RBP eCLIP11.25□□□□□ -0.61
SSR3-205ENST00000467789 NHLH1Q02575 133 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 STK38Q15208 465 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 CTXN3Q4LDR2 81 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 SPECC1Q5M775 1068 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 SPATA1Q5VX52 437 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 ATL3Q6DD88 541 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 ADALQ6DHV7 355 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 SLC39A4Q6P5W5 647 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 RSPO2Q6UXX9 243 aaPredicted RBP11.25□□□□□ -0.61
SSR3-205ENST00000467789 MTSS1LQ765P7 747 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 GET4Q7L5D6 327 aaPredicted RBP11.25□□□□□ -0.61
SSR3-205ENST00000467789 DYMQ7RTS9 669 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 GRASPQ7Z6J2 395 aaPredicted RBP11.25□□□□□ -0.61
SSR3-205ENST00000467789 NT5DC4Q86YG4 428 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 HSCBQ8IWL3 235 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 SLC44A3Q8N4M1 653 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 LINC00301Q8NCQ3 95 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 DNAJC19Q96DA6 116 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 CLIC6Q96NY7 704 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 STRA6Q9BX79 667 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 MRPL44Q9H9J2 332 aaKnown RBP11.25□□□□□ -0.61
SSR3-205ENST00000467789 TUBGCP4Q9UGJ1 667 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 AFF4Q9UHB7 1163 aaKnown RBP11.25□□□□□ -0.61
SSR3-205ENST00000467789 FBXL5Q9UKA1 691 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 C2CD2Q9Y426 696 aa11.25□□□□□ -0.61
SSR3-205ENST00000467789 FRMD3A2A2Y4 597 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 WDR27A2RRH5 827 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 MYMKA6NI61 221 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 PRRG1O14668 218 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 SPTLC2O15270 562 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 CCL16O15467 120 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 MICAL2O94851 1124 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 IL18RAPO95256 599 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 LDHAP00338 332 aaKnown RBP11.24□□□□□ -0.61
SSR3-205ENST00000467789 PTPN2P17706 415 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 TYMPP19971 482 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 IGFBP6P24592 240 aaPredicted RBP11.24□□□□□ -0.61
SSR3-205ENST00000467789 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.61
SSR3-205ENST00000467789 AMPD3Q01432 767 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 YWHAHQ04917 246 aaPredicted RBP11.24□□□□□ -0.61
SSR3-205ENST00000467789 HTR4Q13639 388 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 PABPC1LQ4VXU2 614 aaKnown RBP11.24□□□□□ -0.61
SSR3-205ENST00000467789 ZC2HC1CQ53FD0 456 aaPredicted RBP11.24□□□□□ -0.61
SSR3-205ENST00000467789 STXBP4Q6ZWJ1 553 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 USP37Q86T82 979 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 SFR1Q86XK3 245 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 FGF13Q92913 245 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 ACCSQ96QU6 501 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 RTP3Q9BQQ7 232 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 TNMDQ9H2S6 317 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 SLC2A4RGQ9NR83 387 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 GDE1Q9NZC3 331 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 FBXL21Q9UKT6 434 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 AGO2Q9UKV8 859 aaKnown RBP11.24□□□□□ -0.61
SSR3-205ENST00000467789 POLIQ9UNA4 740 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 DOCK6Q96HP0 2047 aa11.24□□□□□ -0.61
SSR3-205ENST00000467789 ANK1P16157 1881 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 OR6C75A6NL08 312 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 ZNF197O14709 1029 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 KIAA0391O15091 583 aaKnown RBP11.23□□□□□ -0.61
SSR3-205ENST00000467789 CUTAO60888 179 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 PDGFBP01127 241 aaPredicted RBP11.23□□□□□ -0.61
SSR3-205ENST00000467789 ODC1P11926 461 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 IDEP14735 1019 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 CPB1P15086 417 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 AOC1P19801 751 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 GARTP22102 1010 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 VCPP55072 806 aaKnown RBP11.23□□□□□ -0.61
SSR3-205ENST00000467789 LILRA4P59901 499 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 TMEM132DQ14C87 1099 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 L1TD1Q5T7N2 865 aaKnown RBP11.23□□□□□ -0.61
SSR3-205ENST00000467789 JADE1Q6IE81 842 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 DSTYKQ6XUX3 929 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 CCDC65Q8IXS2 484 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 ELMOD1Q8N336 334 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 LEMD2Q8NC56 503 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 PRSS33Q8NF86 280 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 POMGNT1Q8WZA1 660 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 TMEM206Q9H813 350 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 MAGEF1Q9HAY2 307 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 CYP4F11Q9HBI6 524 aa11.23□□□□□ -0.61
SSR3-205ENST00000467789 DNMT3BQ9UBC3 853 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms