RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 AGAP2Q99490 1192 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 GTPBP4Q9BZE4 634 aaKnown RBP4.84□□□□□ -1.63
VPS50-209ENST00000467326 METTL14Q9HCE5 456 aaKnown RBP4.84□□□□□ -1.63
VPS50-209ENST00000467326 FEZ2Q9UHY8 353 aaPredicted RBP4.84□□□□□ -1.63
VPS50-209ENST00000467326 PACSIN3Q9UKS6 424 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 POLHQ9Y253 713 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 NT5C1B-RDH14C9J2C7 533 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 F2RL2O00254 374 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 ARIH2O95376 493 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 EGR2P11161 476 aaPredicted RBP4.83□□□□□ -1.64
VPS50-209ENST00000467326 SMARCA1P28370 1054 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 MCL1Q07820 350 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 SCAPQ12770 1279 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 SNAPC2Q13487 334 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 CYP2A13Q16696 494 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 PGS1Q32NB8 556 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 CCDC93Q567U6 631 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 CCDC181Q5TID7 509 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.83□□□□□ -1.64
VPS50-209ENST00000467326 GPR149Q86SP6 731 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 COLGALT2Q8IYK4 626 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 SLC44A3Q8N4M1 653 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 TMIEQ8NEW7 156 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 LINC00476Q8WZB0 136 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 CAVIN3Q969G5 261 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 FUBP1Q96AE4 644 aaKnown RBP4.83□□□□□ -1.64
VPS50-209ENST00000467326 NACC2Q96BF6 587 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 COQ10AQ96MF6 247 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 TOR3AQ9H497 397 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 TMEM74BQ9NUR3 256 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 GNL3LQ9NVN8 582 aaKnown RBP4.83□□□□□ -1.64
VPS50-209ENST00000467326 TBCCD1Q9NVR7 557 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 SYBUQ9NX95 663 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 SIDT1Q9NXL6 827 aaKnown RBP4.83□□□□□ -1.64
VPS50-209ENST00000467326 SLC45A2Q9UMX9 530 aa4.83□□□□□ -1.64
VPS50-209ENST00000467326 LOC102724159A0A0B4J2E5 919 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 E2F8A0AVK6 867 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 ZFPL1O95159 310 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 ANXA1P04083 346 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 POU2F2P09086 479 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 FTH1P19P0C7X4 201 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 KCNA2P16389 499 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 PROZP22891 400 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 AKAP5P24588 427 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 CYP2C19P33261 490 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 PIK3CGP48736 1102 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 PIGFQ07326 219 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 ZNF844Q08AG5 666 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 PWP2Q15269 919 aaKnown RBP4.82□□□□□ -1.64
VPS50-209ENST00000467326 HEATR3Q7Z4Q2 680 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 PRR18Q8N4B5 295 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 PDPRQ8NCN5 879 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 TMEM125Q96AQ2 219 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 MVB12AQ96EY5 273 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 MAP3K14Q99558 947 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 RHOBTB2Q9BYZ6 727 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 IMPG2Q9BZV3 1241 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 WDCPQ9H6R7 721 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 UNKLQ9H9P5 680 aaKnown RBP4.82□□□□□ -1.64
VPS50-209ENST00000467326 KMT5AQ9NQR1 393 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 RLIMQ9NVW2 624 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 ABCF2Q9UG63 623 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 ANKRD6Q9Y2G4 727 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 RIPOR2Q9Y4F9 1068 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 PCDHA3Q9Y5H8 950 aa4.82□□□□□ -1.64
VPS50-209ENST00000467326 TRGV11A0A075B6L2 103 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 A0A1W2PS29 197 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 MYADML2A6NDP7 307 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 ZNF785A8K8V0 405 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 HMGB1P1B2RPK0 211 aaPredicted RBP4.81□□□□□ -1.64
VPS50-209ENST00000467326 MAP2K6P52564 334 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 HK3P52790 923 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 SEC24CP53992 1094 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 EPHB1P54762 984 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 COL10A1Q03692 680 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 MPP3Q13368 585 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 PREPLQ4J6C6 727 aaPredicted RBP4.81□□□□□ -1.64
VPS50-209ENST00000467326 ODR4Q5SWX8 454 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 CLNKQ7Z7G1 428 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 PDSS2Q86YH6 399 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 SSH3Q8TE77 659 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 BRD9Q9H8M2 597 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 SLAMF7Q9NQ25 335 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 CASS4Q9NQ75 786 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 LMBRD1Q9NUN5 540 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 CFAP97Q9P2B7 532 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 ZNF180Q9UJW8 692 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 NEU2Q9Y3R4 380 aa4.81□□□□□ -1.64
VPS50-209ENST00000467326 PCSK5Q92824 1860 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 PRAMEF33A0A0G2JMD5 474 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 CCDC195A0A1B0GUA6 201 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 E9PLN8 166 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 TOR1BO14657 336 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 AKAP10O43572 662 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 PRAMEF10O60809 474 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 OFD1O75665 1012 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 GJB1P08034 283 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 TYRP1P17643 537 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 PRDX5P30044 214 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 RAB27AP51159 221 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms