RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 PROP1O75360 226 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 GPR32O75388 356 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 AMY1AP04745 511 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 ATP8B2P98198 1209 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 FOXF2Q12947 444 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 ODR4Q5SWX8 454 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 ZBTB46Q86UZ6 589 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 PRR18Q8N4B5 295 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 FITM2Q8N6M3 262 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 NRG4Q8WWG1 115 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 MARS2Q96GW9 593 aaKnown RBP5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 PNKPQ96T60 521 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 SLC17A6Q9P2U8 582 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 HSFX1Q9UBD0 423 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 E2F8A0AVK6 867 aa5.87□□□□□ -1.47
PRPF40A-205ENST00000467114 RFPL1O75677 317 aa5.87□□□□□ -1.47
PRPF40A-205ENST00000467114 NOMO3P69849 1222 aa5.87□□□□□ -1.47
PRPF40A-205ENST00000467114 NOMO2Q5JPE7 1267 aa5.87□□□□□ -1.47
PRPF40A-205ENST00000467114 ARHGEF25Q86VW2 580 aa5.87□□□□□ -1.47
PRPF40A-205ENST00000467114 Q8NA96 180 aa5.87□□□□□ -1.47
PRPF40A-205ENST00000467114 ZNF384Q8TF68 577 aa5.87□□□□□ -1.47
PRPF40A-205ENST00000467114 DMRTA2Q96SC8 542 aa5.87□□□□□ -1.47
PRPF40A-205ENST00000467114 GSTO2Q9H4Y5 243 aa5.87□□□□□ -1.47
PRPF40A-205ENST00000467114 LRRC3CA6NJW4 275 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 XPOTO43592 962 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 SLFN5Q08AF3 891 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 CLUL1Q15846 466 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 GEN1Q17RS7 908 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 DACT2Q5SW24 774 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 EFCAB2Q5VUJ9 269 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 KIAA0895LQ68EN5 471 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 SP5Q6BEB4 398 aaPredicted RBP5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 SRRM1Q8IYB3 904 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 ZGPATQ8N5A5 531 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 CCHCR1Q8TD31 782 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 SSH3Q8TE77 659 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 ANKS1AQ92625 1134 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 NUP88Q99567 741 aaPredicted RBP5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 KLK15Q9H2R5 256 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 WDR26Q9H7D7 661 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 KLHL42Q9P2K6 505 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 LUC7L2Q9Y383 392 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 MRFAP1Q9Y605 127 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 EID1Q9Y6B2 187 aa5.86□□□□□ -1.47
PRPF40A-205ENST00000467114 PPM1GO15355 546 aaPredicted RBP5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 DDCP20711 480 aa5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 FOLR3P41439 243 aa5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 FXR1P51114 621 aaKnown RBP eCLIP5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 DSC2Q02487 901 aa5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 LRRC41Q15345 812 aa5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 C3orf36Q3SXR2 165 aa5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 PNMA8AQ86V59 439 aaPredicted RBP5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 GLCCI1Q86VQ1 547 aa5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 NAF1Q96HR8 494 aaKnown RBP5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 SLC12A5Q9H2X9 1139 aa5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 MANSC1Q9H8J5 431 aa5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 RUVBL1Q9Y265 456 aaKnown RBP5.85□□□□□ -1.47
PRPF40A-205ENST00000467114 TCRBV7S2A1N4TA0A589 114 aa5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 CDHR4A6H8M9 788 aa5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 SNUPNO95149 360 aaKnown RBP5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 S100BP04271 92 aaPredicted RBP5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 POU2F2P09086 479 aa5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 ACAP2Q15057 778 aa5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 PAPD7Q5XG87 772 aaKnown RBP5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 B3GNT9Q6UX72 402 aa5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 PPM1NQ8N819 430 aa5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 DPF2Q92785 391 aa5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 HEPHQ9BQS7 1158 aa5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 AASDHPPTQ9NRN7 309 aa5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 ZIM2Q9NZV7 527 aa5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 ARPP21Q9UBL0 812 aaPredicted RBP5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 PNMA8BQ9ULN7 279 aaPredicted RBP5.84□□□□□ -1.47
PRPF40A-205ENST00000467114 COL3A1P02461 1466 aaPredicted RBP5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 MYBBP1AQ9BQG0 1328 aaKnown RBP5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 TRGV11A0A075B6L2 103 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 A0A1W2PS29 197 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 CCDC154A6NI56 674 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 PRPF3O43395 683 aaKnown RBP5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 PEX1O43933 1283 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 SRGNP10124 158 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 FCER1AP12319 257 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 AKAP5P24588 427 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 SF3B3Q15393 1217 aaKnown RBP5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 NLGN4YQ8NFZ3 816 aaPredicted RBP5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 TBC1D15Q8TC07 691 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 JDP2Q8WYK2 163 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 HSPBAP1Q96EW2 488 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 MRGPRX4Q96LA9 322 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 UROC1Q96N76 676 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 TIMP4Q99727 224 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 IP6K2Q9UHH9 426 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 DNM3Q9UQ16 869 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 ANKRD6Q9Y2G4 727 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 PCDHB1Q9Y5F3 818 aa5.83□□□□□ -1.48
PRPF40A-205ENST00000467114 PROM1O43490 865 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 SGTAO43765 313 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 LPOP22079 712 aaPredicted RBP5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 CTXN1P60606 82 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 KIF23Q02241 960 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms