RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 NLRC4Q9NPP4 1024 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 PLCB1Q9NQ66 1216 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 APEX2Q9UBZ4 518 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 DNAJC12Q9UKB3 198 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 POLIQ9UNA4 740 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 ITIH6Q6UXX5 1313 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 CEP290O15078 2479 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 GRXCR1A8MXD5 290 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 KPNA7A9QM74 516 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 EPHB6O15197 1021 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 SPTLC1O15269 473 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 NOL4O94818 638 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 GALTP07902 379 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 TPM1P09493 284 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 UCHL3P15374 230 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 PBX3P40426 434 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 ALDH7A1P49419 539 aaKnown RBP11.53□□□□□ -0.56
NUP188-204ENST00000467044 RABGGTBP53611 331 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 MFAP3P55082 362 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 LILRA4P59901 499 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 MLLT1Q03111 559 aaPredicted RBP11.53□□□□□ -0.56
NUP188-204ENST00000467044 RAPGEF1Q13905 1077 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 C3orf58Q8NDZ4 430 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 NIF3L1Q9GZT8 377 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 GANQ9H2C0 597 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 RC3H2Q9HBD1 1191 aaKnown RBP11.53□□□□□ -0.56
NUP188-204ENST00000467044 FHOD1Q9Y613 1164 aa11.53□□□□□ -0.56
NUP188-204ENST00000467044 MRPL42Q9Y6G3 142 aaKnown RBP11.53□□□□□ -0.56
NUP188-204ENST00000467044 GOLGA6L6A8MZA4 724 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 F8W810 466 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 I3L4J1 428 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 CYB561D2O14569 222 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 HUS1O60921 280 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 KIF4AO95239 1232 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 STAU1O95793 577 aaKnown RBP11.52□□□□□ -0.57
NUP188-204ENST00000467044 ITGB1P05556 798 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 LAG3P18627 525 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 TBXAS1P24557 533 aaPredicted RBP11.52□□□□□ -0.57
NUP188-204ENST00000467044 CASP14P31944 242 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 USP8P40818 1118 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 BRCC3P46736 316 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 RAP1GAPP47736 663 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 CUL2Q13617 745 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 TRIM14Q14142 442 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 TIGD5Q53EQ6 642 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 IQCEQ6IPM2 695 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 DPY19L2P1Q6NXN4 242 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 KCNT2Q6UVM3 1135 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 ZNF397Q8NF99 534 aaPredicted RBP11.52□□□□□ -0.57
NUP188-204ENST00000467044 KAT5Q92993 513 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 SENP8Q96LD8 212 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 FAM81BQ96LP2 452 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 ZNF558Q96NG5 402 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 SPAG5Q96R06 1193 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 VRTNQ9H8Y1 702 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 AAASQ9NRG9 546 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 CEP72Q9P209 647 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 AJAP1Q9UKB5 411 aaPredicted RBP11.52□□□□□ -0.57
NUP188-204ENST00000467044 COL4A6Q14031 1691 aa11.52□□□□□ -0.57
NUP188-204ENST00000467044 LCHNA4D1U4 455 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 TRAPPC3O43617 180 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 GYPCP04921 128 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 WEE2P0C1S8 567 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 MYOGP15173 224 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 CD58P19256 250 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 RFX1P22670 979 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 BMP8BP34820 402 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 CDH8P55286 799 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 GCNT1Q02742 428 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 GOLGA8FQ08AF8 430 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 GOLGA8DPQ0D2H9 430 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 DRAP1Q14919 205 aaPredicted RBP11.51□□□□□ -0.57
NUP188-204ENST00000467044 FIGNQ5HY92 759 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 FAM109BQ6ICB4 259 aaPredicted RBP11.51□□□□□ -0.57
NUP188-204ENST00000467044 CD300LGQ6UXG3 332 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 ENOSF1Q7L5Y1 443 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 COLGALT1Q8NBJ5 622 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 APPL2Q8NEU8 664 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 IQCDQ96DY2 449 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 KREMEN1Q96MU8 473 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 ARID3AQ99856 593 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 STK33Q9BYT3 514 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 EDEM3Q9BZQ6 932 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 SMYD3Q9H7B4 428 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 GDAP2Q9NXN4 497 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 ADAM28Q9UKQ2 775 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 CAPN11Q9UMQ6 739 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 LUC7L2Q9Y383 392 aaKnown RBP11.51□□□□□ -0.57
NUP188-204ENST00000467044 PCDHB4Q9Y5E5 795 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 PCDHB12Q9Y5F1 795 aa11.51□□□□□ -0.57
NUP188-204ENST00000467044 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 A0A1W2PQJ5 194 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 ARHGEF37A1IGU5 675 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 AKR1B15C9JRZ8 316 aaPredicted RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 TMEM189-UBE2V1I3L0A0 370 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 RNF225M0QZC1 329 aaPredicted RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 PTMAP06454 111 aaKnown RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 ODC1P11926 461 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms