RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ITPRIPL2Q3MIP1 535 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 RAB44Q7Z6P3 723 aaPredicted RBP16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 C3orf58Q8NDZ4 430 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 HNRNPLLQ8WVV9 542 aaKnown RBP16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 PRIMPOLQ96LW4 560 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 POLR3BQ9NW08 1133 aaPredicted RBP16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 VAV3Q9UKW4 847 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 MAFFQ9ULX9 164 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 CELSR3Q9NYQ7 3312 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 KIF26AQ9ULI4 1882 aaPredicted RBP16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 KLF18A0A0U1RQI7 1052 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 CCDC196A0A1B0GTZ2 297 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 H7C4K7 107 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 ARL2P36404 184 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 ZNF423Q2M1K9 1284 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 CREB3L3Q68CJ9 461 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 MOXD1Q6UVY6 613 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 GPIHBP1Q8IV16 184 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 LRIG1Q96JA1 1093 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 PPP1R10Q96QC0 940 aaKnown RBP16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 CCDC86Q9H6F5 360 aaKnown RBP16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 SCUBE2Q9NQ36 999 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 PRMT7Q9NVM4 692 aaPredicted RBP16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 AFF4Q9UHB7 1163 aaKnown RBP16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 FBXL5Q9UKA1 691 aa16.19■□□□□ 0.18
HMGXB4-206ENST00000466438 NUP210Q8TEM1 1887 aaPredicted RBP16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 CYSRT1A8MQ03 144 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 TRDMT1O14717 391 aaKnown RBP16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 SYN3O14994 580 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 N4BP3O15049 544 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 PRPF3O43395 683 aaKnown RBP16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 GLRA2P23416 452 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 SEMA3BQ13214 749 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 STXBP5Q5T5C0 1151 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 SYT13Q7L8C5 426 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 TMC8Q8IU68 726 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 BPIFB1Q8TDL5 484 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 LRRC3Q9BY71 257 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 SLKQ9H2G2 1235 aaPredicted RBP16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 PDZD7Q9H5P4 517 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 DDX25Q9UHL0 483 aaKnown RBP16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 TPCN1Q9ULQ1 816 aa16.18■□□□□ 0.18
HMGXB4-206ENST00000466438 ZBTB39O15060 712 aa16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 MAPK8P45983 427 aa16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 MRPL58Q14197 206 aaKnown RBP16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 TRIM61Q5EBN2 209 aa16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 GLRA4Q5JXX5 417 aa16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 ABCA7Q8IZY2 2146 aa16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 NUSAP1Q9BXS6 441 aaKnown RBP16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 ZSWIM4Q9H7M6 989 aa16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 GOLGA2P5Q9HBQ8 144 aa16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 YIPF1Q9Y548 306 aa16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 ACACAQ13085 2346 aa16.17■□□□□ 0.18
HMGXB4-206ENST00000466438 ATG2BQ96BY7 2078 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 DGAT1O75907 488 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 EGFP01133 1207 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 MCM2P49736 904 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 DGKEP52429 567 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 EXOSC10Q01780 885 aaKnown RBP16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 DMC1Q14565 340 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 NECTIN1Q15223 517 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 EPHA7Q15375 998 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 FAM187BQ17R55 369 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 FBXO43Q4G163 708 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 CTXN3Q4LDR2 81 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 USP39Q53GS9 565 aaKnown RBP16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 PIGKQ92643 395 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 THG1LQ9NWX6 298 aaKnown RBP16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 RGL1Q9NZL6 768 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 VPS54Q9P1Q0 977 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 INVSQ9Y283 1065 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 GDAQ9Y2T3 454 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 THADAQ6YHU6 1953 aa16.16■□□□□ 0.18
HMGXB4-206ENST00000466438 KALRNO60229 2985 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 SLC37A4O43826 429 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 PRAMEF12O95522 483 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 APC2O95996 2303 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 ENGP17813 658 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 DRD1P21728 446 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 DHPSP49366 369 aaPredicted RBP16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 AKAP17AQ02040 695 aaKnown RBP16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 PLD1Q13393 1074 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 ZNF280DQ6N043 979 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 RPLP0P6Q8NHW5 317 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 ACDQ96AP0 544 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 CHFRQ96EP1 664 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 FAM20AQ96MK3 541 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 POLR3FQ9H1D9 316 aaPredicted RBP16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 FZD8Q9H461 694 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 RAXQ9Y2V3 346 aa16.15■□□□□ 0.18
HMGXB4-206ENST00000466438 TENM4Q6N022 2769 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 LRRIQ4A6NIV6 560 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 TTLL13PA6NNM8 815 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 BCKDHBP21953 392 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 WEE1P30291 646 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms