RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 NETO2Q8NC67 525 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 KLHDC9Q8NEP7 349 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 IL31RAQ8NI17 732 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 CPLX3Q8WVH0 158 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 SEC16BQ96JE7 1060 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 JAKMIP1Q96N16 626 aaKnown RBP5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 PRO3102Q9H379 93 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 ABHD16BQ9H3Z7 469 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 XPNPEP3Q9NQH7 507 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 SLC5A4Q9NY91 659 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 KIAA1522Q9P206 1035 aaPredicted RBP5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 NRBP1Q9UHY1 535 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 ZMYND8Q9ULU4 1186 aaPredicted RBP5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 AKT3Q9Y243 479 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 CNPY2Q9Y2B0 182 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 TELO2Q9Y4R8 837 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 SCN5AQ14524 2016 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 GRIN2DO15399 1336 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 ABCB11O95342 1321 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 SCN10AQ9Y5Y9 1956 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 WDR81Q562E7 1941 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 KLF18A0A0U1RQI7 1052 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 ERICH2A1L162 156 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 C7orf72A4D263 438 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 ANKRD34BA5PLL1 514 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 CCDC69A6NI79 296 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 DNM1LO00429 736 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 DDAH1O94760 285 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 CFBP00751 764 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 CELA3BP08861 270 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 RARBP10826 455 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 AKR1A1P14550 325 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 RPS6KB1P23443 525 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 HSD17B4P51659 736 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 GJA9P57773 515 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 GHRHRQ02643 423 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 TNFAIP2Q03169 654 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 TOB2Q14106 344 aaPredicted RBP5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 SART3Q15020 963 aaKnown RBP5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 LY6KQ17RY6 165 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 MBLAC2Q68D91 279 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 USP17L6PQ6QN14 398 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 SLC39A5Q6ZMH5 540 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 Q6ZUG5 572 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 TMTC3Q6ZXV5 915 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 CATIPQ7Z7H3 387 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 B3GNT8Q7Z7M8 397 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 SGMS1Q86VZ5 419 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 MICU3Q86XE3 530 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 FANCBQ8NB91 859 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 MAP3K14Q99558 947 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 SPATA25Q9BR10 227 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 SPZ1Q9BXG8 430 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 AMNQ9BXJ7 453 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 KRTAP4-5Q9BYR2 181 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 UPF3AQ9H1J1 476 aaKnown RBP5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 ACBD3Q9H3P7 528 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 CLEC1BQ9P126 229 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 FAM184BQ9ULE4 1060 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 EMC9Q9Y3B6 208 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 PCDHA1Q9Y5I3 950 aa5.53□□□□□ -1.52
EXOSC3-204ENST00000465860 CHD9Q3L8U1 2897 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 TRBV23OR9-2A0A075B6M9 112 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 SH3D21A4FU49 640 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 TRIM43BA6NCK2 446 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 ASB14A6NK59 587 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 KBTBD13C9JR72 458 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 MEIS2O14770 477 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 PRICKLE3O43900 615 aaPredicted RBP5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 MSCO60682 206 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 DUSP11O75319 330 aaKnown RBP5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 KCNH1O95259 989 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 ASGR1P07306 291 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 C6orf222P0C671 652 aaPredicted RBP5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 CASTP20810 708 aaKnown RBP5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 CST5P28325 142 aaPredicted RBP5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 ACLYP53396 1101 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 PSMC6P62333 389 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 SP2Q02086 613 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 SCRN1Q12765 414 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 PGM5Q15124 567 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 UBE2SQ16763 222 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 TRIM60Q495X7 471 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 WWC2Q6AWC2 1192 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 CCDC62Q6P9F0 684 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 SEPT14Q6ZU15 432 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 TLK2Q86UE8 772 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 ARRDC4Q8NCT1 418 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 DNERQ8NFT8 737 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 SMARCC2Q8TAQ2 1214 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 TRIM43Q96BQ3 446 aaPredicted RBP5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 PEX11GQ96HA9 241 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 NOX5Q96PH1 765 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 HTATIP2Q9BUP3 242 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 AGXT2Q9BYV1 514 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 WDR11Q9BZH6 1224 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 UPF3BQ9BZI7 483 aaKnown RBP5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 NCOA5Q9HCD5 579 aaKnown RBP5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 GPRC5CQ9NQ84 441 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms