RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 CAVIN2O95810 425 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 CAPNS1P04632 268 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 SPATA31C1P0DKV0 1188 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 OR1D2P34982 312 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 CCR2P41597 374 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 KPNA1P52294 538 aaPredicted RBP10.72□□□□□ -0.69
USP39-212ENST00000465514 GRIK3Q13003 919 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 RAB33AQ14088 237 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 TRIM29Q14134 588 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 PLK5Q496M5 336 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 CSGALNACT1Q8TDX6 532 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 DEPDC1BQ8WUY9 529 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 SMARCD2Q92925 531 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 MSANTD3Q96H12 275 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 ZSWIM3Q96MP5 696 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 CORO1BQ9BR76 489 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 TMEM60Q9H2L4 133 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 TMEM9BQ9NQ34 198 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 HECTD1Q9ULT8 2610 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 MYO18BQ8IUG5 2567 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 CCDC163A0A0D9SF12 145 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 CASTOR2A6NHX0 329 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 SPECC1L-ADORA2AF8WAN1 911 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 MED24O75448 989 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 AKAP3O75969 853 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 PTPN2P17706 415 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 ATP2B1P20020 1258 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 CTHP32929 405 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 MCM7P33993 719 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 NEK4P51957 841 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 MLLT6P55198 1093 aaPredicted RBP10.71□□□□□ -0.69
USP39-212ENST00000465514 CCINQ13939 588 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 PON2Q15165 354 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 PKN3Q6P5Z2 889 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 C1orf228Q6PIY5 440 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 CATSPER3Q86XQ3 398 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 MKNK1Q9BUB5 465 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 DUSP15Q9H1R2 295 aaPredicted RBP10.71□□□□□ -0.69
USP39-212ENST00000465514 TUFT1Q9NNX1 390 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 PRMT7Q9NVM4 692 aaPredicted RBP10.71□□□□□ -0.69
USP39-212ENST00000465514 CACNA2D2Q9NY47 1150 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 ADAMTS9Q9P2N4 1935 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 ZMYM2Q9UBW7 1377 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 CDY1Q9Y6F8 540 aa10.71□□□□□ -0.69
USP39-212ENST00000465514 ZNF462Q96JM2 2506 aa10.71□□□□□ -0.7
USP39-212ENST00000465514 PLXNB3Q9ULL4 1909 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 TNRC6BQ9UPQ9 1833 aaKnown RBP10.7□□□□□ -0.7
USP39-212ENST00000465514 SPAARA0A1B0GVQ0 90 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 BCLAF3A2AJT9 711 aaKnown RBP10.7□□□□□ -0.7
USP39-212ENST00000465514 TTLL13PA6NNM8 815 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 CDX4O14627 284 aaPredicted RBP10.7□□□□□ -0.7
USP39-212ENST00000465514 LRG1P02750 347 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 GUCY1B3Q02153 619 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 ELF2Q15723 593 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 FAM187BQ17R55 369 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 UAP1L1Q3KQV9 507 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 CDCA2Q69YH5 1023 aaPredicted RBP10.7□□□□□ -0.7
USP39-212ENST00000465514 PDXDC1Q6P996 788 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 PDZD4Q76G19 769 aaPredicted RBP10.7□□□□□ -0.7
USP39-212ENST00000465514 RTL10Q7L3V2 364 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 MFSD6LQ8IWD5 586 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 ZBTB8OSQ8IWT0 167 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 GLIS3Q8NEA6 775 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 MCPH1Q8NEM0 835 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 TTC8Q8TAM2 541 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 ZSCAN18Q8TBC5 510 aaPredicted RBP10.7□□□□□ -0.7
USP39-212ENST00000465514 FAM200AQ8TCP9 573 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 BSNDQ8WZ55 320 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 PRIMPOLQ96LW4 560 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 NACC1Q96RE7 527 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 POLR3CQ9BUI4 534 aaPredicted RBP10.7□□□□□ -0.7
USP39-212ENST00000465514 FZD8Q9H461 694 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 PDZD7Q9H5P4 517 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 C8orf33Q9H7E9 229 aaPredicted RBP10.7□□□□□ -0.7
USP39-212ENST00000465514 SNTG2Q9NY99 539 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 MTRRQ9UBK8 725 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 USP20Q9Y2K6 914 aa10.7□□□□□ -0.7
USP39-212ENST00000465514 ARHGEF37A1IGU5 675 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 MYBPHLA2RUH7 354 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 HEPACAM2A8MVW5 462 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 PTGESO14684 152 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 ZNF197O14709 1029 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 N4BP3O15049 544 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 DCLK1O15075 740 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 SIM1P81133 766 aaPredicted RBP10.69□□□□□ -0.7
USP39-212ENST00000465514 ST3GAL1Q11201 340 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 TUSC3Q13454 348 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 PRPF4BQ13523 1007 aaKnown RBP10.69□□□□□ -0.7
USP39-212ENST00000465514 SAFBQ15424 915 aaKnown RBP eCLIP10.69□□□□□ -0.7
USP39-212ENST00000465514 ZNF174Q15697 407 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 TMEM132AQ24JP5 1023 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 PADI6Q6TGC4 694 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 RALGPS2Q86X27 583 aaPredicted RBP10.69□□□□□ -0.7
USP39-212ENST00000465514 NOSTRINQ8IVI9 506 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 YAF2Q8IY57 180 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 SYNPOQ8N3V7 929 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 RSPRY1Q96DX4 576 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 LRIG1Q96JA1 1093 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 C2orf40Q9H1Z8 148 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 CXCL16Q9H2A7 254 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms