RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 CCDC183Q5T5S1 534 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 ANKRD40Q6AI12 368 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 SLC8B1Q6J4K2 584 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 ZNF280DQ6N043 979 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 DPH6Q7L8W6 267 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 TRAPPC11Q7Z392 1133 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 ADGRD2Q7Z7M1 963 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 MICALL1Q8N3F8 863 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 LNX1Q8TBB1 728 aaPredicted RBP14.78□□□□□ -0.04
LIMD1-203ENST00000465039 HASPINQ8TF76 798 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 NOC3LQ8WTT2 800 aaKnown RBP14.78□□□□□ -0.04
LIMD1-203ENST00000465039 RIN2Q8WYP3 895 aaPredicted RBP14.78□□□□□ -0.04
LIMD1-203ENST00000465039 CCDC127Q96BQ5 260 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 BORCS6Q96GS4 357 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 KLHL5Q96PQ7 755 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 UBE2ZQ9H832 354 aaPredicted RBP14.78□□□□□ -0.04
LIMD1-203ENST00000465039 VRTNQ9H8Y1 702 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 RWDD2AQ9UIY3 292 aa14.78□□□□□ -0.04
LIMD1-203ENST00000465039 REV3LO60673 3130 aa14.77□□□□□ -0.04
LIMD1-203ENST00000465039 SCN1AP35498 2009 aa14.77□□□□□ -0.04
LIMD1-203ENST00000465039 PTPRJQ12913 1337 aa14.77□□□□□ -0.04
LIMD1-203ENST00000465039 KPNA7A9QM74 516 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 BIN1O00499 593 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 TEX28O15482 410 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 CLASP2O75122 1294 aaKnown RBP14.77□□□□□ -0.05
LIMD1-203ENST00000465039 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
LIMD1-203ENST00000465039 POLR2BP30876 1174 aaKnown RBP14.77□□□□□ -0.05
LIMD1-203ENST00000465039 CASP4P49662 377 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 VAMP7P51809 220 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 MARSP56192 900 aaKnown RBP14.77□□□□□ -0.05
LIMD1-203ENST00000465039 YWHAHQ04917 246 aaPredicted RBP14.77□□□□□ -0.05
LIMD1-203ENST00000465039 ZACNQ401N2 412 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 VARS2Q5ST30 1063 aaKnown RBP14.77□□□□□ -0.05
LIMD1-203ENST00000465039 CYP26C1Q6V0L0 522 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 TAS1R1Q7RTX1 841 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 TMEM86AQ8N2M4 240 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 RDH13Q8NBN7 331 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 OR5B17Q8NGF7 314 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 SLC22A17Q8WUG5 538 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 NELFBQ8WX92 580 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 RABGGTAQ92696 567 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 TAF4BQ92750 862 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 FAXDC2Q96IV6 333 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 PLEKHA4Q9H4M7 779 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 SIX4Q9UIU6 781 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 HCFC2Q9Y5Z7 792 aa14.77□□□□□ -0.05
LIMD1-203ENST00000465039 TSC2P49815 1807 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 OR6C75A6NL08 312 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 LRRIQ3A6PVS8 624 aaPredicted RBP14.76□□□□□ -0.05
LIMD1-203ENST00000465039 TBC1D4O60343 1298 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 GLUD1P00367 558 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 TKTP29401 623 aaKnown RBP14.76□□□□□ -0.05
LIMD1-203ENST00000465039 BRCC3P46736 316 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 CLCN4P51793 760 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 GUCY2FP51841 1108 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 RAB33AQ14088 237 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 SKIV2LQ15477 1246 aaKnown RBP14.76□□□□□ -0.05
LIMD1-203ENST00000465039 CCDC85BQ15834 202 aaPredicted RBP14.76□□□□□ -0.05
LIMD1-203ENST00000465039 KLHL40Q2TBA0 621 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 LEXMQ3ZCV2 418 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 DSTYKQ6XUX3 929 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 C15orf39Q6ZRI6 1047 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 LIMS2Q7Z4I7 341 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 FRMD5Q7Z6J6 570 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 FILIP1Q7Z7B0 1213 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 CSGALNACT2Q8N6G5 542 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 TOP6BLQ8N6T0 577 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 SENP8Q96LD8 212 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 FAM124BQ9H5Z6 455 aaPredicted RBP14.76□□□□□ -0.05
LIMD1-203ENST00000465039 ARMCX3Q9UH62 379 aaPredicted RBP14.76□□□□□ -0.05
LIMD1-203ENST00000465039 AGAP1Q9UPQ3 857 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 FAM50BQ9Y247 325 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 PCDHGC5Q9Y5F6 944 aa14.76□□□□□ -0.05
LIMD1-203ENST00000465039 SPTLC1O15269 473 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 PMM2O15305 246 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 GLP2RO95838 553 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 POU2F2P09086 479 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 KLRC2P26717 231 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 PMS1P54277 932 aaKnown RBP14.75□□□□□ -0.05
LIMD1-203ENST00000465039 NLRP12P59046 1061 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 SMARCB1Q12824 385 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 TPGS2Q68CL5 300 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 METTL23Q86XA0 190 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 CEP57Q86XR8 500 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 CMASQ8NFW8 434 aaPredicted RBP14.75□□□□□ -0.05
LIMD1-203ENST00000465039 PLEKHO2Q8TD55 490 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 AUTS2Q8WXX7 1259 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 HPDLQ96IR7 371 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 MSLNLQ96KJ4 702 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 DUSP9Q99956 384 aaKnown RBP14.75□□□□□ -0.05
LIMD1-203ENST00000465039 CLSTN3Q9BQT9 956 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 TMEM8AQ9HCN3 771 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 CLDND1Q9NY35 253 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 HSFX1Q9UBD0 423 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 CTNND2Q9UQB3 1225 aa14.75□□□□□ -0.05
LIMD1-203ENST00000465039 TRIM49BA6NDI0 452 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 C2CD2LO14523 706 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 PPEF2O14830 753 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 HUS1O60921 280 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 TBX10O75333 385 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms