RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TKFCQ3LXA3 575 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 ENOSF1Q7L5Y1 443 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 BCAS3Q9H6U6 928 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 ANLNQ9NQW6 1124 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 PCMTD2Q9NV79 361 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 FBXO40Q9UH90 709 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 APOBEC2Q9Y235 224 aaKnown RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 PDGFRBP09619 1106 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 RARGP13631 454 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 ANXA13P27216 316 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 TYK2P29597 1187 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 PPP3CAQ08209 521 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 NR1H3Q13133 447 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 SUPT20HL1Q3ZLR7 823 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 XKR3Q5GH77 459 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 ACAD10Q6JQN1 1059 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 PDZD4Q76G19 769 aaPredicted RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 APTXQ7Z2E3 356 aaKnown RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 RNF135Q8IUD6 432 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 RMDN2Q96LZ7 410 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 TSSK1BQ9BXA7 367 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 CHST7Q9NS84 486 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 XPO7Q9UIA9 1087 aaKnown RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 TRAF3IP3Q9Y228 551 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 PCDHGC5Q9Y5F6 944 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 SNX9Q9Y5X1 595 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 NEMP1O14524 444 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 PJA2O43164 708 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 PRKCBP05771 671 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 LCP1P13796 627 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 POU5F1BQ06416 359 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 FOXD4Q12950 439 aaPredicted RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 HEATR6Q6AI08 1181 aaKnown RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 ZNF384Q8TF68 577 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 ZKSCAN4Q969J2 545 aaPredicted RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 SPATA33Q96N06 139 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 THTPAQ9BU02 230 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 SIK2Q9H0K1 926 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 STRIP2Q9ULQ0 834 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 KIF1CO43896 1103 aaKnown RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 ENTPD3O75355 529 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 SLC12A3P55017 1021 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 ARPP19P56211 112 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 DRP2Q13474 957 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 ART3Q13508 389 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 DALRD3Q5D0E6 543 aaKnown RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 MAP3K21Q5TCX8 1036 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 MROH9Q5TGP6 573 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 IL31Q6EBC2 164 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 JADE1Q6IE81 842 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 LLGL2Q6P1M3 1020 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 FAM111AQ96PZ2 611 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 PURBQ96QR8 312 aaKnown RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 FZD1Q9UP38 647 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 NKRFO15226 690 aaKnown RBP eCLIP9.55□□□□□ -0.88
HPS4-208ENST00000464362 SOX11P35716 441 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 SLC1A1P43005 524 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 PPM1FP49593 454 aaPredicted RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 VPS72Q15906 364 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 HABP4Q5JVS0 413 aaKnown RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 APOBEC3HQ6NTF7 200 aaKnown RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 TRIM72Q6ZMU5 477 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 OTOP1Q7RTM1 612 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 PID1Q7Z2X4 250 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 ARID3BQ8IVW6 561 aaPredicted RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 CERS5Q8N5B7 392 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 FEZF2Q8TBJ5 459 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 FAM151AQ8WW52 585 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 PIK3R5Q8WYR1 880 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 KIF12Q96FN5 646 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 INPP4AQ96PE3 977 aaPredicted RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 FAM129AQ9BZQ8 928 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 GDF3Q9NR23 364 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 HOXC10Q9NYD6 342 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 ZC3H7BQ9UGR2 993 aaKnown RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 PEAK1Q9H792 1746 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 A8MXQ7 604 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 OPLAHO14841 1288 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 ZSCAN5DPP0CG00 497 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 RARRES1P49788 294 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 PTK7Q13308 1070 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.55□□□□□ -0.88
HPS4-208ENST00000464362 NOP9Q86U38 636 aaKnown RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 STAMBPL1Q96FJ0 436 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 MTMR12Q9C0I1 747 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 hCG_2014768A0A024R1R8 64 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 H3BRJ5 948 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 ANP32DO95626 131 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 RFC1P35251 1148 aaPredicted RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 MAP7Q14244 749 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 MOV10L1Q9BXT6 1211 aaKnown RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 TEX13BQ9BXU2 312 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 GPATCH2LQ9NWQ4 482 aa9.55□□□□□ -0.88
HPS4-208ENST00000464362 PSMC3IPQ9P2W1 217 aaPredicted RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 SAE1Q9UBE0 346 aaPredicted RBP9.55□□□□□ -0.88
HPS4-208ENST00000464362 SPDYE16A6NNV3 312 aaPredicted RBP9.54□□□□□ -0.88
HPS4-208ENST00000464362 FOXO6A8MYZ6 492 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 B2RBV5 119 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms