RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 MAP3K12Q12852 859 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 CDSNQ15517 529 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 ATP2B3Q16720 1220 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 TM4SF20Q53R12 229 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 C9orf50Q5SZB4 431 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 SLFN13Q68D06 897 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 USP38Q8NB14 1042 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 WDR66Q8TBY9 1149 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 ATXN2LQ8WWM7 1075 aaKnown RBP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 DVL3Q92997 716 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 BORCS6Q96GS4 357 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 SCLYQ96I15 445 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 AJUBAQ96IF1 538 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 IL25Q9H293 177 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 DEF6Q9H4E7 631 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 CD248Q9HCU0 757 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 UCKL1Q9NWZ5 548 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 DNAH12Q6ZR08 3092 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 TRIM75PA6NK02 468 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 SCDO00767 359 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 RAB11FIP3O75154 756 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 C4BPAP04003 597 aaKnown RBP4.32□□□□□ -1.72
SCFD1-204ENST00000463622 FOSL2P15408 326 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 TNFRSF1AP19438 455 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 MX1P20591 662 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 CYP2B6P20813 491 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 HOXA7P31268 230 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-204ENST00000463622 SPP2Q13103 211 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 FAM47CQ5HY64 1035 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 FGD2Q7Z6J4 655 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 TTC9BQ8N6N2 239 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 NEUROD6Q96NK8 337 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 ASB2Q96Q27 587 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 C1QTNF3Q9BXJ4 246 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 KATNBL1Q9H079 304 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 KLC2Q9H0B6 622 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 CDC42EP3Q9UKI2 254 aa4.32□□□□□ -1.72
SCFD1-204ENST00000463622 OTOFQ9HC10 1997 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 DDTLA6NHG4 134 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 FRAT2O75474 233 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 MMEP08473 750 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 PTGS1P23219 599 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 CCND3P30281 292 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 MCAMP43121 646 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 IL13RA1P78552 427 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 PUM3Q15397 648 aaKnown RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 WDR72Q3MJ13 1102 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 TTC22Q5TAA0 569 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 LRSAM1Q6UWE0 723 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 GPRC5AQ8NFJ5 357 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 DNERQ8NFT8 737 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 ZNF384Q8TF68 577 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 SOCS4Q8WXH5 440 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 LMF1Q96S06 567 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 DNAJC2Q99543 621 aaKnown RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 P2RX7Q99572 595 aaKnown RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 SENP6Q9GZR1 1112 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 BOLA2Q9H3K6 86 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 TXNRD2Q9NNW7 524 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 GPR108Q9NPR9 543 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 PIH1D3Q9NQM4 214 aaKnown RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 DNM1LO00429 736 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 FOXS1O43638 330 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 HOXC6P09630 235 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 PRDX5P30044 214 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 MAPK4P31152 587 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 KCNQ1P51787 676 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 PABPC4Q13310 644 aaKnown RBP eCLIP4.31□□□□□ -1.723e-10■■■□□ 16.3
SCFD1-204ENST00000463622 RRP1BQ14684 758 aaKnown RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 CCL14Q16627 93 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 FIGNQ5HY92 759 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 AKNAD1Q5T1N1 836 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 TCTN3Q6NUS6 607 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 ABHD17CQ6PCB6 329 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 SLC39A5Q6ZMH5 540 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 ERC1Q8IUD2 1116 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 CLASRPQ8N2M8 674 aaKnown RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 LILRB2Q8N423 598 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 Q8TCH9 128 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 LPIN2Q92539 896 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 LPAR1Q92633 364 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 BADQ92934 168 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 MAGEB10Q96LZ2 347 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 AMNQ9BXJ7 453 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 DDX4Q9NQI0 724 aaKnown RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 INCENPQ9NQS7 918 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 HMG20BQ9P0W2 317 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 BTBD7Q9P203 1132 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-204ENST00000463622 HDAC5Q9UQL6 1122 aa4.31□□□□□ -1.72
SCFD1-204ENST00000463622 PIEZO1Q92508 2521 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 GAKO14976 1311 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 SALL1Q9NSC2 1324 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 RFX7Q2KHR2 1363 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 TRIM43BA6NCK2 446 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 PATE3B3GLJ2 98 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 GSTA4O15217 222 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 ZNF623O75123 536 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 IFIT2P09913 472 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 459.7 ms