RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SLC8B1Q6J4K2 584 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 PDXDC1Q6P996 788 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 PALB2Q86YC2 1186 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 ADSSL1Q8N142 457 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 C12orf76Q8N812 135 aaPredicted RBP19.12■□□□□ 0.65
VPS52-214ENST00000463486 MTMR12Q9C0I1 747 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 CDH22Q9UJ99 828 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 HOOK1Q9UJC3 728 aaKnown RBP19.12■□□□□ 0.65
VPS52-214ENST00000463486 TCF20Q9UGU0 1960 aaKnown RBP19.12■□□□□ 0.65
VPS52-214ENST00000463486 KIF20AO95235 890 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 SPATA31D3P0C874 917 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 CD44P16070 742 aaKnown RBP19.11■□□□□ 0.65
VPS52-214ENST00000463486 PAX3P23760 479 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 OR1D2P34982 312 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 RAB33AQ14088 237 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 MORC3Q14149 939 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 SURF1Q15526 300 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 CENPPQ6IPU0 288 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 SPATA31D4Q6ZUB0 917 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 ANKS3Q6ZW76 656 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 WDR49Q8IV35 697 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 GLYCTKQ8IVS8 523 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 PARD3BQ8TEW8 1205 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 SENP8Q96LD8 212 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 DZANK1Q9NVP4 752 aa19.11■□□□□ 0.65
VPS52-214ENST00000463486 USP15Q9Y4E8 981 aaPredicted RBP19.11■□□□□ 0.65
VPS52-214ENST00000463486 TIMM13Q9Y5L4 95 aaPredicted RBP19.11■□□□□ 0.65
VPS52-214ENST00000463486 CALUO43852 315 aaPredicted RBP19.1■□□□□ 0.65
VPS52-214ENST00000463486 GLUD1P00367 558 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 ITGB3P05106 788 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 TYMPP19971 482 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 POLR2BP30876 1174 aaKnown RBP19.1■□□□□ 0.65
VPS52-214ENST00000463486 PMS1P54277 932 aaKnown RBP19.1■□□□□ 0.65
VPS52-214ENST00000463486 DUOXA2Q1HG44 320 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 C1orf220Q5T0J3 134 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 ISM2Q6H9L7 571 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 HDAC7Q8WUI4 952 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 CACTINQ8WUQ7 758 aaKnown RBP19.1■□□□□ 0.65
VPS52-214ENST00000463486 CCDC127Q96BQ5 260 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 COL25A1Q9BXS0 654 aaPredicted RBP19.1■□□□□ 0.65
VPS52-214ENST00000463486 ADAM7Q9H2U9 754 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 MAN1C1Q9NR34 630 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 FBXL5Q9UKA1 691 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 ITGA11Q9UKX5 1188 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 AGAP1Q9UPQ3 857 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 CDY1Q9Y6F8 540 aa19.1■□□□□ 0.65
VPS52-214ENST00000463486 PPP1R3GB7ZBB8 358 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 AKAP3O75969 853 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 ABLIM3O94929 683 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 CST3P01034 146 aaPredicted RBP19.09■□□□□ 0.65
VPS52-214ENST00000463486 CYP11A1P05108 521 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 SRGAP2BP0DMP2 458 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 TAF6P49848 677 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 EDRF1Q3B7T1 1238 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 TRAPPC11Q7Z392 1133 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 LIMS2Q7Z4I7 341 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 ZC3H3Q8IXZ2 948 aaKnown RBP19.09■□□□□ 0.65
VPS52-214ENST00000463486 CSGALNACT2Q8N6G5 542 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 LRRC52Q8N7C0 313 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 APPL2Q8NEU8 664 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 ADAMTS19Q8TE59 1207 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 NECAB3Q96P71 396 aaPredicted RBP19.09■□□□□ 0.65
VPS52-214ENST00000463486 CGRRF1Q99675 332 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 APOL5Q9BWW9 433 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 FBXW11Q9UKB1 542 aa19.09■□□□□ 0.65
VPS52-214ENST00000463486 LRRIQ3A6PVS8 624 aaPredicted RBP19.08■□□□□ 0.64
VPS52-214ENST00000463486 KPNA7A9QM74 516 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 MAPK13O15264 365 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 DLATP10515 647 aaKnown RBP19.08■□□□□ 0.64
VPS52-214ENST00000463486 NR2F2P24468 414 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 DLG4P78352 724 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 RBP5P82980 135 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 ROR1Q01973 937 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 CAMK4Q16566 473 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 ANKRD40Q6AI12 368 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 DSTYKQ6XUX3 929 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 KREMEN2Q8NCW0 462 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 CMASQ8NFW8 434 aaPredicted RBP19.08■□□□□ 0.64
VPS52-214ENST00000463486 ZNF707Q96C28 371 aaPredicted RBP19.08■□□□□ 0.64
VPS52-214ENST00000463486 RTP3Q9BQQ7 232 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 GTPBP4Q9BZE4 634 aaKnown RBP19.08■□□□□ 0.64
VPS52-214ENST00000463486 PLEKHA4Q9H4M7 779 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 CD320Q9NPF0 282 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 KIAA1468Q9P260 1216 aa19.08■□□□□ 0.64
VPS52-214ENST00000463486 MTCL1Q9Y4B5 1905 aaKnown RBP19.08■□□□□ 0.64
VPS52-214ENST00000463486 WDR27A2RRH5 827 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 H7C4K7 107 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 RFPL2O75678 378 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 VNN2O95498 520 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 TMEM191BP0C7N4 346 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 ITIH3Q06033 890 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 ADAM9Q13443 819 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 RARS2Q5T160 578 aaKnown RBP19.07■□□□□ 0.64
VPS52-214ENST00000463486 TMC5Q6UXY8 1006 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 GPR149Q86SP6 731 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 ZNF461Q8TAF7 563 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 TMC2Q8TDI7 906 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 ANKRD36BP1Q96IX9 119 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 RHOBTB2Q9BYZ6 727 aa19.07■□□□□ 0.64
VPS52-214ENST00000463486 CLSTN2Q9H4D0 955 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms