RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 AP3M2P53677 418 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 PDIA6Q15084 440 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 TRIM16LQ309B1 348 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 GJB7Q6PEY0 223 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 ATP11BQ9Y2G3 1177 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 VIRMAQ69YN4 1812 aaKnown RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 OPLAHO14841 1288 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 HSPA1AP0DMV8 641 aaKnown RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 HSPA1BP0DMV9 641 aaKnown RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 PEX5P50542 639 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 MKRN4PQ13434 485 aaPredicted RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 SLC12A1Q13621 1099 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 TRADDQ15628 312 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 ZNF699Q32M78 642 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 CC2D2BQ6DHV5 1058 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 MPP4Q96JB8 637 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 MMADHCQ9H3L0 296 aaPredicted RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 RPF1Q9H9Y2 349 aaKnown RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 KLHL11Q9NVR0 708 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 PSTPIP1O43586 416 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 YWHAHQ04917 246 aaPredicted RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 MTFR1Q15390 333 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 DOK7Q18PE1 504 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 LACTB2Q53H82 288 aaPredicted RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 RNF43Q68DV7 783 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 LRRC6Q86X45 466 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 CPA5Q8WXQ8 436 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 ZFRQ96KR1 1074 aaKnown RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 PCDHB2Q9Y5E7 798 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 IQCKQ8N0W5 287 aa16.58■□□□□ 0.25
SMC4-204ENST00000462787 PAGR1Q9BTK6 254 aa16.58■□□□□ 0.25
SMC4-204ENST00000462787 EML4Q9HC35 981 aaKnown RBP16.58■□□□□ 0.25
SMC4-204ENST00000462787 BTBD7Q9P203 1132 aa16.58■□□□□ 0.25
SMC4-204ENST00000462787 APOL1O14791 398 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 ATMINO43313 823 aaPredicted RBP16.58■□□□□ 0.24
SMC4-204ENST00000462787 WFS1O76024 890 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 PSMC3P17980 439 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 SNRPFP62306 86 aaKnown RBP16.58■□□□□ 0.24
SMC4-204ENST00000462787 TAF12Q16514 161 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 PAK5Q9P286 719 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 ITGB1BP2Q9UKP3 347 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 GZMAP12544 262 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 ATP6V1C1P21283 382 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 NUP107P57740 925 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 SNAP25P60880 206 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 ADCK1Q86TW2 530 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 NDUFAF2Q8N183 169 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 TTC8Q8TAM2 541 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 CKAP2Q8WWK9 683 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 HERC5Q9UII4 1024 aaKnown RBP16.58■□□□□ 0.24
SMC4-204ENST00000462787 CPS1P31327 1500 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 LOC100653049A0A140TA62 436 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 KIAA0391O15091 583 aaKnown RBP16.58■□□□□ 0.24
SMC4-204ENST00000462787 KRT34O76011 436 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 RPA1P27694 616 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 KRT76Q01546 638 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 EAPPQ56P03 285 aaPredicted RBP16.58■□□□□ 0.24
SMC4-204ENST00000462787 WLSQ5T9L3 541 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 FAM84BQ96KN1 310 aaPredicted RBP16.58■□□□□ 0.24
SMC4-204ENST00000462787 RAB6BQ9NRW1 208 aa16.58■□□□□ 0.24
SMC4-204ENST00000462787 ACAD10Q6JQN1 1059 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 LRRC4Q9HBW1 653 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 GTPBP10A4D1E9 387 aaKnown RBP16.57■□□□□ 0.24
SMC4-204ENST00000462787 TCP10L2B9ZVM9 353 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 TRIM49D1C9J1S8 452 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 SFNP31947 248 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 KCNJ2P63252 427 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 GRAPQ13588 217 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 C7orf31Q8N865 590 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 GRAPLQ8TC17 118 aaPredicted RBP16.57■□□□□ 0.24
SMC4-204ENST00000462787 TMEM237Q96Q45 408 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 FRMD8P1Q9BZ68 369 aaPredicted RBP16.57■□□□□ 0.24
SMC4-204ENST00000462787 OSGEPQ9NPF4 335 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 WDR35Q9P2L0 1181 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 TPP2P29144 1249 aaPredicted RBP16.57■□□□□ 0.24
SMC4-204ENST00000462787 CNGA2Q16280 664 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 TTC33Q6PID6 262 aaPredicted RBP16.57■□□□□ 0.24
SMC4-204ENST00000462787 C1orf228Q6PIY5 440 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 PRUNE1Q86TP1 453 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 BBS5Q8N3I7 341 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 BEGAINQ9BUH8 593 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 C20orf96Q9NUD7 363 aaPredicted RBP16.57■□□□□ 0.24
SMC4-204ENST00000462787 A0A087X0B3 334 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 SERPINB1P30740 379 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 RPL21P46778 160 aaKnown RBP16.57■□□□□ 0.24
SMC4-204ENST00000462787 NFX1Q12986 1120 aaKnown RBP16.57■□□□□ 0.24
SMC4-204ENST00000462787 ARL13BQ3SXY8 428 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 AGR3Q8TD06 166 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 NCLNQ969V3 563 aa16.57■□□□□ 0.24
SMC4-204ENST00000462787 KCNN4O15554 427 aa16.56■□□□□ 0.24
SMC4-204ENST00000462787 GSTT1P30711 240 aa16.56■□□□□ 0.24
SMC4-204ENST00000462787 SKIV2L2P42285 1042 aaKnown RBP16.56■□□□□ 0.24
SMC4-204ENST00000462787 MTMR1Q13613 665 aa16.56■□□□□ 0.24
SMC4-204ENST00000462787 RSPH3Q86UC2 560 aa16.56■□□□□ 0.24
SMC4-204ENST00000462787 MTRQ99707 1265 aa16.56■□□□□ 0.24
SMC4-204ENST00000462787 ADNPQ9H2P0 1102 aa16.56■□□□□ 0.24
SMC4-204ENST00000462787 RGS2P41220 211 aa16.56■□□□□ 0.24
SMC4-204ENST00000462787 TNFAIP1Q13829 316 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms