RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 ANK1P16157 1881 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 RHOBTB3O94955 611 aa20.37■□□□□ 0.85
COL9A3-203ENST00000462700 CYP2J2P51589 502 aa20.37■□□□□ 0.85
COL9A3-203ENST00000462700 ROR1Q01973 937 aa20.37■□□□□ 0.85
COL9A3-203ENST00000462700 YWHAHQ04917 246 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-203ENST00000462700 SNW1Q13573 536 aaKnown RBP20.37■□□□□ 0.85
COL9A3-203ENST00000462700 CTXN3Q4LDR2 81 aa20.37■□□□□ 0.85
COL9A3-203ENST00000462700 LIN9Q5TKA1 542 aa20.37■□□□□ 0.85
COL9A3-203ENST00000462700 C12orf56Q8IXR9 622 aa20.37■□□□□ 0.85
COL9A3-203ENST00000462700 XXYLT1Q8NBI6 393 aa20.37■□□□□ 0.85
COL9A3-203ENST00000462700 ENGASEQ8NFI3 743 aa20.37■□□□□ 0.85
COL9A3-203ENST00000462700 ZNF707Q96C28 371 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-203ENST00000462700 TIMM13Q9Y5L4 95 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-203ENST00000462700 C8AP07357 584 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 ODC1P11926 461 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 TYMPP19971 482 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 SP100P23497 879 aaPredicted RBP20.36■□□□□ 0.85
COL9A3-203ENST00000462700 TAF6P49848 677 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 FAM160A1Q05DH4 1040 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 KCNB1Q14721 858 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 SURF1Q15526 300 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 SNRNP35Q16560 246 aaKnown RBP20.36■□□□□ 0.85
COL9A3-203ENST00000462700 C1orf127Q8N9H9 656 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 GOLGA5Q8TBA6 731 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 CACTINQ8WUQ7 758 aaKnown RBP20.36■□□□□ 0.85
COL9A3-203ENST00000462700 SMG7Q92540 1137 aaKnown RBP20.36■□□□□ 0.85
COL9A3-203ENST00000462700 FAM84AQ96KN4 292 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 SENP8Q96LD8 212 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 PRKD2Q9BZL6 878 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 TSHZ2Q9NRE2 1034 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 CHMP5Q9NZZ3 219 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 NR2E1Q9Y466 385 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 CUL9Q8IWT3 2517 aa20.36■□□□□ 0.85
COL9A3-203ENST00000462700 WDR27A2RRH5 827 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 OAZ2O95190 189 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 ITGB3P05106 788 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 TMEM191BP0C7N4 346 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 ARPP19P56211 112 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 RNF135Q8IUD6 432 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 RDH13Q8NBN7 331 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 ZNF461Q8TAF7 563 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 SLC7A14Q8TBB6 771 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 ZNF560Q96MR9 790 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 MTMR12Q9C0I1 747 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 KCTD10Q9H3F6 313 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 ITGA11Q9UKX5 1188 aa20.35■□□□□ 0.85
COL9A3-203ENST00000462700 PTPRJQ12913 1337 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 C2CD4DB7Z1M9 353 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 ABLIM3O94929 683 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 HNRNPA1P09651 372 aaKnown RBP eCLIP20.34■□□□□ 0.85
COL9A3-203ENST00000462700 POLR2BP30876 1174 aaKnown RBP20.34■□□□□ 0.85
COL9A3-203ENST00000462700 HOXA9P31269 272 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 PNOCQ13519 176 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 UVSSAQ2YD98 709 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 SV2CQ496J9 727 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 PPM1LQ5SGD2 360 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 LMBRD2Q68DH5 695 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-203ENST00000462700 CCDC149Q6ZUS6 474 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 USP37Q86T82 979 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 CXorf38Q8TB03 319 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 BORCS6Q96GS4 357 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 ANKRD36BP1Q96IX9 119 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 OXCT2Q9BYC2 517 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-203ENST00000462700 EPHX3Q9H6B9 360 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 INTS13Q9NVM9 706 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 AGAP1Q9UPQ3 857 aa20.34■□□□□ 0.85
COL9A3-203ENST00000462700 ARHGEF37A1IGU5 675 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 PI4K2BG5E9Z4 385 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 PDXKO00764 312 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 KIF20AO95235 890 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 CYP11A1P05108 521 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 ATF2P15336 505 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 PNPLA4P41247 253 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 CYP24A1Q07973 514 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 PSMD6Q15008 389 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 TPGS2Q68CL5 300 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 OVOS1Q6IE37 1185 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 RTL10Q7L3V2 364 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 WDR49Q8IV35 697 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 CSGALNACT2Q8N6G5 542 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 OR5B17Q8NGF7 314 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 TMEM174Q8WUU8 243 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 TIGD1Q96MW7 591 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 PIDD1Q9HB75 910 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 WDR6Q9NNW5 1121 aaKnown RBP20.33■□□□□ 0.85
COL9A3-203ENST00000462700 USTQ9Y2C2 406 aa20.33■□□□□ 0.85
COL9A3-203ENST00000462700 CLUHO75153 1309 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 OR6C75A6NL08 312 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 KPNA7A9QM74 516 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 CYB561D2O14569 222 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 DCXO43602 365 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 EXOC3O60645 756 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 TNNC2P02585 160 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 POU2F2P09086 479 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 CPB1P15086 417 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 SCARA3Q6AZY7 606 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 SLC9A9Q8IVB4 645 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 LRRC52Q8N7C0 313 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 TDRD5Q8NAT2 981 aaKnown RBP20.32■□□□□ 0.84
COL9A3-203ENST00000462700 DMAC2Q9NW81 257 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms