RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 IRS2Q9Y4H2 1338 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 A0A1W2PPH5 198 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 PI4KAP2A4QPH2 592 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.49□□□□□ -1.85
SMC4-203ENST00000462668 UBA7P41226 1012 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 RTP1P59025 263 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 TAF11Q15544 211 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 NAA35Q5VZE5 725 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 FCRL6Q6DN72 434 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 MSL3Q8N5Y2 521 aaKnown RBP3.49□□□□□ -1.85
SMC4-203ENST00000462668 PIK3C3Q8NEB9 887 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 PEX11GQ96HA9 241 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 TBC1D32Q96NH3 1257 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 C7orf25Q9BPX7 421 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 NOL10Q9BSC4 688 aaKnown RBP3.49□□□□□ -1.85
SMC4-203ENST00000462668 EPS8L2Q9H6S3 715 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 KCND1Q9NSA2 647 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 RXFP3Q9NSD7 469 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 ABCF2Q9UG63 623 aa3.49□□□□□ -1.85
SMC4-203ENST00000462668 C1QTNF9BB2RNN3 333 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 AHCYL1O43865 530 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 FDXRP22570 491 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 PCSK1P29120 753 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 CCT4P50991 539 aaKnown RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 CHRNEQ04844 493 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 SMAD1Q15797 465 aaKnown RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 TBC1D10BQ4KMP7 808 aaPredicted RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 SNX30Q5VWJ9 437 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 SULT6B1Q6IMI4 303 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 ACAD10Q6JQN1 1059 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 TMTC3Q6ZXV5 915 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 CREG2Q8IUH2 290 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 ADGRG2Q8IZP9 1017 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 TTC30BQ8N4P2 665 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 HIPK4Q8NE63 616 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 BRIX1Q8TDN6 353 aaKnown RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 TDP1Q9NUW8 608 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 MAGED2Q9UNF1 606 aaPredicted RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 MTO1Q9Y2Z2 717 aaKnown RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 SSU72P8A0A1W2PR75 194 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 TNFRSF6BO95407 300 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 GASTP01350 101 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 CYBBP04839 570 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 HOXC13P31276 330 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 AFMP43652 599 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 DRG2P55039 364 aaKnown RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 UBE3AQ05086 875 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.48□□□□□ -1.857e-6■■■□□ 17.7
SMC4-203ENST00000462668 CTBP1Q13363 440 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 PLCL1Q15111 1095 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 TMTC4Q5T4D3 741 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 RINLQ6ZS11 566 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 GALNT4Q8N4A0 578 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 OR6Y1Q8NGX8 325 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 MISP3Q96FF7 219 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 LTV1Q96GA3 475 aaPredicted RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 BARD1Q99728 777 aaKnown RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 VRK1Q99986 396 aaPredicted RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 KCNH6Q9H252 994 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 ARMT1Q9H993 441 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 FEZ2Q9UHY8 353 aaPredicted RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 CYP46A1Q9Y6A2 500 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 CECR2Q9BXF3 1484 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 KIF13AQ9H1H9 1805 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 A0A1W2PQM1 296 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 H3BUI4 141 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 DYRK3O43781 588 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 CBFA2T3O75081 653 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 MAPK4P31152 587 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 DGKDQ16760 1214 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 KHDC1LQ5JSQ8 128 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 MFSD5Q6N075 450 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 FAM180AQ6UWF9 173 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 ZNF572Q7Z3I7 529 aaPredicted RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 CLEC14AQ86T13 490 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 PDZD8Q8NEN9 1154 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 OR6B3Q8NGW1 331 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 ASB11Q8WXH4 323 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 ERCC4Q92889 916 aaPredicted RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 ZDHHC12Q96GR4 267 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 CENPOQ9BU64 300 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 SENP6Q9GZR1 1112 aaPredicted RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 SPON1Q9HCB6 807 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 USP40Q9NVE5 1235 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 LRFN1Q9P244 771 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 NFKBIL1Q9UBC1 381 aaPredicted RBP3.48□□□□□ -1.85
SMC4-203ENST00000462668 AASSQ9UDR5 926 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 VPS51Q9UID3 782 aa3.48□□□□□ -1.85
SMC4-203ENST00000462668 FITM1A5D6W6 292 aa3.47□□□□□ -1.85
SMC4-203ENST00000462668 HRKO00198 91 aa3.47□□□□□ -1.85
SMC4-203ENST00000462668 ANXA1P04083 346 aa3.47□□□□□ -1.85
SMC4-203ENST00000462668 IL1R2P27930 398 aa3.47□□□□□ -1.85
SMC4-203ENST00000462668 CARSP49589 748 aaKnown RBP3.47□□□□□ -1.85
SMC4-203ENST00000462668 PAPOLAP51003 745 aaKnown RBP3.47□□□□□ -1.85
SMC4-203ENST00000462668 ADSSL1Q8N142 457 aa3.47□□□□□ -1.85
SMC4-203ENST00000462668 SCAMP5Q8TAC9 235 aa3.47□□□□□ -1.85
SMC4-203ENST00000462668 IPO4Q8TEX9 1081 aaKnown RBP3.47□□□□□ -1.85
SMC4-203ENST00000462668 ZNF480Q8WV37 535 aa3.47□□□□□ -1.85
SMC4-203ENST00000462668 DBNDD2Q9BQY9 259 aa3.47□□□□□ -1.85
SMC4-203ENST00000462668 C1orf43Q9BWL3 253 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms