RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 PATJQ8NI35 1801 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 LACTBL1A8MY62 500 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 H0YCG3 227 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 PPEF2O14830 753 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 HNRNPDLO14979 420 aaKnown RBP17.52■□□□□ 0.4
COL7A1-204ENST00000462475 KINO60870 393 aaKnown RBP17.52■□□□□ 0.4
COL7A1-204ENST00000462475 OAZ2O95190 189 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 MAGEA9P43362 315 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 LIG4P49917 911 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 EPHA5P54756 1037 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 CSTF1Q05048 431 aaKnown RBP17.52■□□□□ 0.4
COL7A1-204ENST00000462475 PPP2R3AQ06190 1150 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 FZD5Q13467 585 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 ENOX2Q16206 610 aaKnown RBP17.52■□□□□ 0.4
COL7A1-204ENST00000462475 ZNF528Q3MIS6 628 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 VITQ6UXI7 678 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 ZNF852Q6ZMS4 543 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 DCLK2Q8N568 766 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 KCNN1Q92952 543 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 ZNF512Q96ME7 567 aaPredicted RBP17.52■□□□□ 0.4
COL7A1-204ENST00000462475 PGLYRP2Q96PD5 576 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 CRISPLD1Q9H336 500 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 BRD9Q9H8M2 597 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 ASAH2Q9NR71 780 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 ODF2LQ9ULJ1 636 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 MAFFQ9ULX9 164 aa17.52■□□□□ 0.4
COL7A1-204ENST00000462475 FANCMQ8IYD8 2048 aa17.52■□□□□ 0.39
COL7A1-204ENST00000462475 K7ENM7 598 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 PIGRP01833 764 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 CYP3A5P20815 502 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 VIPR2P41587 438 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 DHX8Q14562 1220 aaKnown RBP17.51■□□□□ 0.39
COL7A1-204ENST00000462475 TEAD2Q15562 447 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 ERMP1Q7Z2K6 904 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 RUBCNQ92622 972 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 SMARCD2Q92925 531 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 RMDN1Q96DB5 314 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 AK8Q96MA6 479 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 NELL2Q99435 816 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 TRMT61BQ9BVS5 477 aaKnown RBP17.51■□□□□ 0.39
COL7A1-204ENST00000462475 BLOC1S4Q9NUP1 217 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 TBX20Q9UMR3 447 aa17.51■□□□□ 0.39
COL7A1-204ENST00000462475 COL4A2P08572 1712 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 FAM13AO94988 1023 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 GDI1P31150 447 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 RPS9P46781 194 aaKnown RBP17.5■□□□□ 0.39
COL7A1-204ENST00000462475 ZNF131P52739 623 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 GRIN1Q05586 938 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 SLC39A4Q6P5W5 647 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 TSSK4Q6SA08 328 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 DSTYKQ6XUX3 929 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 USP37Q86T82 979 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 MAP4K3Q8IVH8 894 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 ZNF687Q8N1G0 1237 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 MYCT1Q8N699 235 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 LEMD2Q8NC56 503 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 SHKBP1Q8TBC3 707 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 ZSCAN18Q8TBC5 510 aaPredicted RBP17.5■□□□□ 0.39
COL7A1-204ENST00000462475 DNAJC25Q9H1X3 360 aa17.5■□□□□ 0.39
COL7A1-204ENST00000462475 RPF1Q9H9Y2 349 aaKnown RBP17.5■□□□□ 0.39
COL7A1-204ENST00000462475 NDRG2Q9UN36 371 aaKnown RBP17.5■□□□□ 0.39
COL7A1-204ENST00000462475 MRPS17Q9Y2R5 130 aaKnown RBP17.5■□□□□ 0.39
COL7A1-204ENST00000462475 OR6C75A6NL08 312 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 SPTLC1O15269 473 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 OGTO15294 1046 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 NCAM2O15394 837 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 SLC26A4O43511 780 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 ADRB2P07550 413 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 PSMC3P17980 439 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 PLCG1P19174 1290 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 UBA7P41226 1012 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 DUSP4Q13115 394 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 MTAPQ13126 283 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 MCM6Q14566 821 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 KARSQ15046 597 aaKnown RBP17.49■□□□□ 0.39
COL7A1-204ENST00000462475 KYAT1Q16773 422 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 TMC8Q8IU68 726 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 IRF7Q92985 503 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 CALML4Q96GE6 196 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 TMEM209Q96SK2 561 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 FIZ1Q96SL8 496 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 MSTO1Q9BUK6 570 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 LRRC3Q9BY71 257 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 SLITRK6Q9H5Y7 841 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 TRPV4Q9HBA0 871 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 PARVGQ9HBI0 331 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 ZNF334Q9HCZ1 680 aaPredicted RBP17.49■□□□□ 0.39
COL7A1-204ENST00000462475 PRMT8Q9NR22 394 aaPredicted RBP17.49■□□□□ 0.39
COL7A1-204ENST00000462475 PCDHGA2Q9Y5H1 932 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.49■□□□□ 0.39
COL7A1-204ENST00000462475 MYH11P35749 1972 aa17.49■□□□□ 0.39
COL7A1-204ENST00000462475 A0A0B4J269 797 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 A0A1W2PRU2 124 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 MTMR11A4FU01 709 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 XPOTO43592 962 aaKnown RBP17.48■□□□□ 0.39
COL7A1-204ENST00000462475 TRAK2O60296 914 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 NFICP08651 508 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 GPR17Q13304 367 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 SPATA1Q5VX52 437 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 OVOS1Q6IE37 1185 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms