RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 MARK3P27448 753 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 GSTT1P30711 240 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 ARL2P36404 184 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 ZNF131P52739 623 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 SLC12A3P55017 1021 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 NPEPPSP55786 919 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 MRPS6P82932 125 aaKnown RBP6.38□□□□□ -1.39
VPS36-202ENST00000462289 CDC42EP1Q00587 391 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 MAPK7Q13164 816 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 PPIGQ13427 754 aaKnown RBP eCLIP6.38□□□□□ -1.391e-7■□□□□ 8.8
VPS36-202ENST00000462289 DRP2Q13474 957 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 CTTNQ14247 550 aaKnown RBP6.38□□□□□ -1.39
VPS36-202ENST00000462289 TMEM266Q2M3C6 531 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 LRIT3Q3SXY7 679 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 FBXO47Q5MNV8 452 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 NCAPH2Q6IBW4 605 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 C1orf186Q6ZWK4 172 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 USP49Q70CQ1 688 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 ZNF410Q86VK4 478 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS36-202ENST00000462289 EXOC8Q8IYI6 725 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 DAW1Q8N136 415 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 TOP6BLQ8N6T0 577 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 TMEM40Q8WWA1 233 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 DPF3Q92784 378 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 BADQ92934 168 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 ZBTB10Q96DT7 871 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 HEXIM2Q96MH2 286 aaKnown RBP6.38□□□□□ -1.39
VPS36-202ENST00000462289 NTPCRQ9BSD7 190 aaKnown RBP6.38□□□□□ -1.39
VPS36-202ENST00000462289 RAB34Q9BZG1 259 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 RC3H2Q9HBD1 1191 aaKnown RBP6.38□□□□□ -1.39
VPS36-202ENST00000462289 IFT122Q9HBG6 1241 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 NRBP2Q9NSY0 501 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 MBNL3Q9NUK0 354 aaKnown RBP6.38□□□□□ -1.39
VPS36-202ENST00000462289 KCND2Q9NZV8 630 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 LRWD1Q9UFC0 647 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 TCEAL9Q9UHQ7 104 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 ZMYND8Q9ULU4 1186 aaPredicted RBP6.38□□□□□ -1.39
VPS36-202ENST00000462289 SNX11Q9Y5W9 270 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 ANK1P16157 1881 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 CITO14578 2027 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 A0A087X0B3 334 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 FRMD3A2A2Y4 597 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 VWA3AA6NCI4 1184 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 RSPH10B2B2RC85 870 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 SPTLC2O15270 562 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 BAIAP3O94812 1187 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 RSPH10BP0C881 870 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 RAG1P15918 1043 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 SYN1P17600 705 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 CYP11B2P19099 503 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 ATP2B1P20020 1258 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 GUCY2CP25092 1073 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 MAPK1P28482 360 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 CDC25AP30304 524 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 CD96P40200 585 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 GPC3P51654 580 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 CRYBB1P53674 252 aaPredicted RBP6.37□□□□□ -1.39
VPS36-202ENST00000462289 NUCB2P80303 420 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 CYP4A11Q02928 519 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 FPGSQ05932 587 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 GNL2Q13823 731 aaKnown RBP6.37□□□□□ -1.39
VPS36-202ENST00000462289 LPIN1Q14693 890 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 PCBP1Q15365 356 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS36-202ENST00000462289 ARSHQ5FYA8 562 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 FAM47CQ5HY64 1035 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 C9orf50Q5SZB4 431 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 RESP18Q5W5W9 173 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 PLA2G4FQ68DD2 849 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 CDCA2Q69YH5 1023 aaPredicted RBP6.37□□□□□ -1.39
VPS36-202ENST00000462289 PSRC1Q6PGN9 363 aaPredicted RBP6.37□□□□□ -1.39
VPS36-202ENST00000462289 SHC4Q6S5L8 630 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 TSHZ1Q6ZSZ6 1077 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 OTUD6AQ7L8S5 288 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 TMEM199Q8N511 208 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 SYT2Q8N9I0 419 aaPredicted RBP6.37□□□□□ -1.39
VPS36-202ENST00000462289 ERMNQ8TAM6 284 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 KCNG4Q8TDN1 519 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 LEO1Q8WVC0 666 aaPredicted RBP6.37□□□□□ -1.39
VPS36-202ENST00000462289 DNAJB3Q8WWF6 145 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 LINC01599Q8WXQ3 324 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 ZNF396Q96N95 335 aaPredicted RBP6.37□□□□□ -1.39
VPS36-202ENST00000462289 FIZ1Q96SL8 496 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 JPH2Q9BR39 696 aaPredicted RBP6.37□□□□□ -1.39
VPS36-202ENST00000462289 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS36-202ENST00000462289 CELF4Q9BZC1 486 aaKnown RBP6.37□□□□□ -1.39
VPS36-202ENST00000462289 CEP44Q9C0F1 390 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 NT5C3AQ9H0P0 336 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 CSRNP2Q9H175 543 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 AGO3Q9H9G7 860 aaKnown RBP6.37□□□□□ -1.39
VPS36-202ENST00000462289 C17orf75Q9HAS0 396 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 ERVK-5Q9HDB9 667 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 KBTBD4Q9NVX7 518 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 HPSEQ9Y251 543 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 SAMM50Q9Y512 469 aa6.37□□□□□ -1.39
VPS36-202ENST00000462289 REV3LO60673 3130 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 ABHD14A-ACY1A0A1B0GW23 586 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 A0A1W2PQ27 194 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 A0A1W2PQ64 194 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms