RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 DPYSL4O14531 572 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 ABLIM1O14639 778 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 NARSO43776 548 aaKnown RBP9.6□□□□□ -0.87
LDB1-203ENST00000461873 ABLIM3O94929 683 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 FGF19O95750 216 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 MYL4P12829 197 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 AOC1P19801 751 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 PNPLA4P41247 253 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 TAF6P49848 677 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 POU5F1Q01860 360 aaKnown RBP9.6□□□□□ -0.87
LDB1-203ENST00000461873 PTPAQ15257 358 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 ENOX2Q16206 610 aaKnown RBP9.6□□□□□ -0.87
LDB1-203ENST00000461873 SV2CQ496J9 727 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 ARHGAP15Q53QZ3 475 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 FOXD4L5Q5VV16 416 aaPredicted RBP9.6□□□□□ -0.87
LDB1-203ENST00000461873 SPATA1Q5VX52 437 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 FAM173BQ6P4H8 233 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 POTEHQ6S545 545 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 ITIH5Q86UX2 942 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 NT5DC4Q86YG4 428 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 TCEAL8Q8IYN2 117 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 KCNG4Q8TDN1 519 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 FOXD4L4Q8WXT5 416 aaPredicted RBP9.6□□□□□ -0.87
LDB1-203ENST00000461873 ING5Q8WYH8 240 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 PGLYRP2Q96PD5 576 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 USP28Q96RU2 1077 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 BCO2Q9BYV7 579 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 ST6GALNAC4Q9H4F1 302 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 ZFP14Q9HCL3 533 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 ARHGEF3Q9NR81 526 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 HCFC1R1Q9NWW0 138 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 DPP3Q9NY33 737 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 DNMT3BQ9UBC3 853 aaKnown RBP9.6□□□□□ -0.87
LDB1-203ENST00000461873 MTMR6Q9Y217 621 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 MRPS17Q9Y2R5 130 aaKnown RBP9.6□□□□□ -0.87
LDB1-203ENST00000461873 SIT1Q9Y3P8 196 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 C2CD2Q9Y426 696 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 TIMM13Q9Y5L4 95 aaPredicted RBP9.6□□□□□ -0.87
LDB1-203ENST00000461873 INSL5Q9Y5Q6 135 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 TRIOO75962 3097 aa9.6□□□□□ -0.87
LDB1-203ENST00000461873 PDCD11Q14690 1871 aaKnown RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 MUC6Q6W4X9 2439 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 ANHXE9PGG2 379 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 M0QZQ0 153 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 CYB561D2O14569 222 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 KIAA0391O15091 583 aaKnown RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 CUTAO60888 179 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 N4BP1O75113 896 aaKnown RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 PPP6R2O75170 966 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 KRT19P08727 400 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 TMEM191BP0C7N4 346 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 TYMPP19971 482 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 ME1P48163 572 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 TUFMP49411 452 aaKnown RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 LILRA4P59901 499 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 ASIC1P78348 528 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 TFAMQ00059 246 aaKnown RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 TSPY1Q01534 308 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 PRKCQQ04759 706 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 HTR4Q13639 388 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 MYBPC2Q14324 1141 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 SURF1Q15526 300 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 FOXD4L6Q3SYB3 417 aaPredicted RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 MGAT5BQ3V5L5 792 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 L1TD1Q5T7N2 865 aaKnown RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 ZC3H14Q6PJT7 736 aaKnown RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 PARM1Q6UWI2 310 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 RSPO2Q6UXX9 243 aaPredicted RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 FOXD4L3Q6VB84 417 aaPredicted RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 CEP57L1Q8IYX8 460 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 DCP1BQ8IZD4 617 aaKnown RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 TMEM105Q8N8V8 129 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 ITFG1Q8TB96 612 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 KCNN1Q92952 543 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 DHX58Q96C10 678 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 ANKRD36BP1Q96IX9 119 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 SENP8Q96LD8 212 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 KXD1Q9BQD3 176 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 FAM213AQ9BRX8 229 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 TNMDQ9H2S6 317 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 BRD9Q9H8M2 597 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 TBC1D17Q9HA65 648 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 SLC2A4RGQ9NR83 387 aa9.59□□□□□ -0.87
LDB1-203ENST00000461873 RBAKQ9NYW8 714 aaPredicted RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 TFIP11Q9UBB9 837 aaKnown RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 CPSF3Q9UKF6 684 aaKnown RBP9.59□□□□□ -0.87
LDB1-203ENST00000461873 TCHHQ07283 1943 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 MYMKA6NI61 221 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 ANKRD63C9JTQ0 380 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 GFRA3O60609 400 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 HUS1O60921 280 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 ECI2O75521 394 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 MICAL2O94851 1124 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 OAZ2O95190 189 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 PAPLNO95428 1278 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 YEATS4O95619 227 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 TNNC2P02585 160 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 NFICP08651 508 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 GARTP22102 1010 aa9.58□□□□□ -0.88
LDB1-203ENST00000461873 ANP32AP39687 249 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms