RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 SYTL1Q8IYJ3 562 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 LGI4Q8N135 537 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 ZFP28Q8NHY6 868 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 CXorf38Q8TB03 319 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 SLC35B2Q8TB61 432 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 TFAP2CQ92754 450 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 ZNF566Q969W8 418 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 MBD6Q96DN6 1003 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 IQCDQ96DY2 449 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 LTV1Q96GA3 475 aaPredicted RBP3.82□□□□□ -1.8
VCL-203ENST00000461383 TMEM176AQ96HP8 235 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 PHACTR3Q96KR7 559 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 LMF1Q96S06 567 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 CPPED1Q9BRF8 314 aaPredicted RBP3.82□□□□□ -1.8
VCL-203ENST00000461383 XYLT2Q9H1B5 865 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 RLIMQ9NVW2 624 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 JKAMPQ9P055 326 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 POGKQ9P215 609 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 SLC23A1Q9UHI7 598 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 OAZ3Q9UMX2 235 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 JAG2Q9Y219 1238 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 MED16Q9Y2X0 877 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 PAXBP1Q9Y5B6 917 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 PCDHGB2Q9Y5G2 931 aa3.82□□□□□ -1.8
VCL-203ENST00000461383 PMS2P1A4D2B8 440 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 TBKBP1A7MCY6 615 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 M0QYG6 137 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 THAP12O43422 761 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 FOXD2O60548 495 aaPredicted RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 SLC43A1O75387 559 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 RASSF9O75901 435 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 STC2O76061 302 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 UNC5CO95185 931 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ANXA1P04083 346 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 THP07101 528 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 HARSP12081 509 aaKnown RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 TSHRP16473 764 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 HALP42357 657 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ZNF135P52742 658 aaPredicted RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 ADAM8P78325 824 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ICA1Q05084 483 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 PMS2P11Q13670 270 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 KIF22Q14807 665 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 KRT72Q14CN4 511 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 AMOTQ4VCS5 1084 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 FKBP15Q5T1M5 1219 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ATXN7L2Q5T6C5 722 aaPredicted RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 UTP14CQ5TAP6 766 aaKnown RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 NT5DC1Q5TFE4 455 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 KLHDC7AQ5VTJ3 777 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ANKS6Q68DC2 871 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 MFSD5Q6N075 450 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 EFCAB12Q6NXP0 572 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 PGBD2Q6P3X8 592 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 CCDC174Q6PII3 467 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ZNF354CQ86Y25 554 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 PDSS2Q86YH6 399 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 CPXCR1Q8N123 301 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 SLC15A4Q8N697 577 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 FITM2Q8N6M3 262 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ATP11CQ8NB49 1132 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 GIMAP8Q8ND71 665 aaPredicted RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 MYRIPQ8NFW9 859 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 TBC1D15Q8TC07 691 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 IPCEF1Q8WWN9 437 aaPredicted RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 BRI3BPQ8WY22 251 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 CFHR4Q92496 578 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 DDX17Q92841 729 aaKnown RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 NMD3Q96D46 503 aaKnown RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 NEIL1Q96FI4 390 aaPredicted RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 ZC3H10Q96K80 434 aaKnown RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 MSLNLQ96KJ4 702 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 SNX22Q96L94 193 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ZNF512Q96ME7 567 aaPredicted RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 OR14A2Q96R54 314 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 NDC1Q9BTX1 674 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 STK31Q9BXU1 1019 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 TRIM54Q9BYV2 358 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ZNF518BQ9C0D4 1074 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 WDR12Q9GZL7 423 aaKnown RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 ENKD1Q9H0I2 346 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 SIK2Q9H0K1 926 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 KCNH6Q9H252 994 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 NELFAQ9H3P2 528 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 GSTO2Q9H4Y5 243 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ZCCHC4Q9H5U6 513 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 STK32BQ9NY57 414 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 ITGB1BP2Q9UKP3 347 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 HDAC9Q9UKV0 1011 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 CLCA2Q9UQC9 943 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 TMX2Q9Y320 296 aa3.81□□□□□ -1.8
VCL-203ENST00000461383 MORC2Q9Y6X9 1032 aaPredicted RBP3.81□□□□□ -1.8
VCL-203ENST00000461383 CCDC189A1A4V9 331 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 CDHR4A6H8M9 788 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 TRIM43BA6NCK2 446 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 F8W8V4 182 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 WNT10BO00744 389 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 B4GALT3O60512 393 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 MFAP3LO75121 409 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 FGF18O76093 207 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms