RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 CD300LGQ6UXG3 332 aa14.88□□□□□ -0.03
CHRD-209ENST00000461120 TRAPPC11Q7Z392 1133 aa14.88□□□□□ -0.03
CHRD-209ENST00000461120 AOPEPQ8N6M6 819 aa14.88□□□□□ -0.03
CHRD-209ENST00000461120 C3orf58Q8NDZ4 430 aa14.88□□□□□ -0.03
CHRD-209ENST00000461120 FBXO22Q8NEZ5 403 aa14.88□□□□□ -0.03
CHRD-209ENST00000461120 CXorf38Q8TB03 319 aa14.88□□□□□ -0.03
CHRD-209ENST00000461120 ARNTL2Q8WYA1 636 aa14.88□□□□□ -0.03
CHRD-209ENST00000461120 CNOT6LQ96LI5 555 aaKnown RBP14.88□□□□□ -0.03
CHRD-209ENST00000461120 UBE2ZQ9H832 354 aaPredicted RBP14.88□□□□□ -0.03
CHRD-209ENST00000461120 SAMSN1Q9NSI8 373 aaKnown RBP14.88□□□□□ -0.03
CHRD-209ENST00000461120 SIX4Q9UIU6 781 aa14.88□□□□□ -0.03
CHRD-209ENST00000461120 ITGA11Q9UKX5 1188 aa14.88□□□□□ -0.03
CHRD-209ENST00000461120 EPOPA6NHQ4 379 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 PIRO00625 290 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 FGF18O76093 207 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 B3GAT3O94766 335 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 CAVIN2O95810 425 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 C4BPAP04003 597 aaKnown RBP14.87□□□□□ -0.03
CHRD-209ENST00000461120 ITGB3P05106 788 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 ITGB1P05556 798 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 ZNF445P59923 1031 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 PLCB3Q01970 1234 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 PPP3CAQ08209 521 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 DCAF17Q5H9S7 520 aaPredicted RBP14.87□□□□□ -0.03
CHRD-209ENST00000461120 TCERG1LQ5VWI1 586 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 SCARA3Q6AZY7 606 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 PTCRAQ6ISU1 281 aaPredicted RBP14.87□□□□□ -0.03
CHRD-209ENST00000461120 FAM114A1Q8IWE2 563 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 TRIM59Q8IWR1 403 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 SUGP1Q8IWZ8 645 aaKnown RBP14.87□□□□□ -0.03
CHRD-209ENST00000461120 HASPINQ8TF76 798 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 ATOH1Q92858 354 aaPredicted RBP14.87□□□□□ -0.03
CHRD-209ENST00000461120 SLC35C1Q96A29 364 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 TMEM169Q96HH4 297 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 C11orf84Q9BUA3 381 aaPredicted RBP14.87□□□□□ -0.03
CHRD-209ENST00000461120 FANCLQ9NW38 375 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 LMCD1Q9NZU5 365 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 ADAM28Q9UKQ2 775 aa14.87□□□□□ -0.03
CHRD-209ENST00000461120 H3BNC9 293 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 STX10O60499 249 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 TADA2AO75478 443 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 POLR2BP30876 1174 aaKnown RBP14.86□□□□□ -0.03
CHRD-209ENST00000461120 GTF2H1P32780 548 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 GCLMP48507 274 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 RBP5P82980 135 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 BIRC3Q13489 604 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 GPM6BQ13491 265 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 IQCB1Q15051 598 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 ZACNQ401N2 412 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 HSP90AA4PQ58FG1 418 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 CDKAL1Q5VV42 579 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 TDRD10Q5VZ19 366 aaKnown RBP14.86□□□□□ -0.03
CHRD-209ENST00000461120 C15orf39Q6ZRI6 1047 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 SV2AQ7L0J3 742 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 DHX40Q8IX18 779 aaKnown RBP14.86□□□□□ -0.03
CHRD-209ENST00000461120 SPPL3Q8TCT6 385 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 VN1R3Q9BXE9 311 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 TSPY26PQ9H489 355 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 CBX8Q9HC52 389 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 TMEM8AQ9HCN3 771 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 ALG13Q9NP73 1137 aaKnown RBP14.86□□□□□ -0.03
CHRD-209ENST00000461120 AGAP1Q9UPQ3 857 aa14.86□□□□□ -0.03
CHRD-209ENST00000461120 SMTNL1A8MU46 457 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 GRM6O15303 877 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 PHACTR2O75167 634 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 EFEMP2O95967 443 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 KRT19P08727 400 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 IL9P15248 144 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 MTIF2P46199 727 aaKnown RBP14.85□□□□□ -0.03
CHRD-209ENST00000461120 BRCC3P46736 316 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 KRT17Q04695 432 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 FUT10Q6P4F1 479 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 DDX53Q86TM3 631 aaKnown RBP14.85□□□□□ -0.03
CHRD-209ENST00000461120 CREBRFQ8IUR6 639 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 LRRC52Q8N7C0 313 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 GDPD5Q8WTR4 605 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 ZNF560Q96MR9 790 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 GPR62Q9BZJ7 368 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 HSD3B7Q9H2F3 369 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 MMRN2Q9H8L6 949 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 MAGEC2Q9UBF1 373 aaPredicted RBP14.85□□□□□ -0.03
CHRD-209ENST00000461120 LZTS1Q9Y250 596 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 NUB1Q9Y5A7 615 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.85□□□□□ -0.03
CHRD-209ENST00000461120 WDR87Q6ZQQ6 2873 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 CHD6Q8TD26 2715 aa14.85□□□□□ -0.03
CHRD-209ENST00000461120 PLXNA4Q9HCM2 1894 aa14.84□□□□□ -0.03
CHRD-209ENST00000461120 KCNJ18B7U540 433 aa14.84□□□□□ -0.03
CHRD-209ENST00000461120 SPTLC1O15269 473 aa14.84□□□□□ -0.03
CHRD-209ENST00000461120 VNN1O95497 513 aa14.84□□□□□ -0.03
CHRD-209ENST00000461120 CST3P01034 146 aaPredicted RBP14.84□□□□□ -0.03
CHRD-209ENST00000461120 KCNA5P22460 613 aa14.84□□□□□ -0.03
CHRD-209ENST00000461120 PAX3P23760 479 aa14.84□□□□□ -0.03
CHRD-209ENST00000461120 EEF1GP26641 437 aaKnown RBP14.84□□□□□ -0.03
CHRD-209ENST00000461120 PNPLA4P41247 253 aa14.84□□□□□ -0.03
CHRD-209ENST00000461120 AARSP49588 968 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHRD-209ENST00000461120 TAF6P49848 677 aa14.84□□□□□ -0.03
CHRD-209ENST00000461120 MXI1P50539 228 aa14.84□□□□□ -0.03
CHRD-209ENST00000461120 LILRA4P59901 499 aa14.84□□□□□ -0.03
CHRD-209ENST00000461120 UBE3AQ05086 875 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms