RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 NXF1Q9UBU9 619 aaKnown RBP11.69□□□□□ -0.54
CSDC2-202ENST00000460790 PRKAG2Q9UGJ0 569 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 LRFN2Q9ULH4 789 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 CNTN6Q9UQ52 1028 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 ZKSCAN5Q9Y2L8 839 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 BZW2Q9Y6E2 419 aaKnown RBP11.69□□□□□ -0.54
CSDC2-202ENST00000460790 SSU72P8A0A1W2PR75 194 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 SOWAHDA6NJG2 315 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 HOXA2O43364 376 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 EVI5O60447 810 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 FGFR1P11362 822 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 CLCN1P35523 988 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 PNPLA4P41247 253 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 ASPAP45381 313 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 KCNJ6P48051 423 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 TAF6P49848 677 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 ARID5AQ03989 594 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 KLHL30Q0D2K2 578 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
CSDC2-202ENST00000460790 TUSC3Q13454 348 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 ASTE1Q2TB18 679 aaPredicted RBP11.68□□□□□ -0.54
CSDC2-202ENST00000460790 COL13A1Q5TAT6 717 aaPredicted RBP11.68□□□□□ -0.54
CSDC2-202ENST00000460790 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.68□□□□□ -0.54
CSDC2-202ENST00000460790 CCDC170Q8IYT3 715 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 URGCPQ8TCY9 931 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 RSPH1Q8WYR4 309 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 DDX27Q96GQ7 796 aaKnown RBP11.68□□□□□ -0.54
CSDC2-202ENST00000460790 ABHD8Q96I13 439 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 ZNF560Q96MR9 790 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 CASD1Q96PB1 797 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 FAM124BQ9H5Z6 455 aaPredicted RBP11.68□□□□□ -0.54
CSDC2-202ENST00000460790 HAUS4Q9H6D7 363 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 CYP3A43Q9HB55 503 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 IL23AQ9NPF7 189 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 GDAP2Q9NXN4 497 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 PYCARDQ9ULZ3 195 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 POLIQ9UNA4 740 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 INPP5FQ9Y2H2 1132 aa11.68□□□□□ -0.54
CSDC2-202ENST00000460790 EPN1Q9Y6I3 576 aaPredicted RBP11.68□□□□□ -0.54
CSDC2-202ENST00000460790 KPNA7A9QM74 516 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 CYP26A1O43174 497 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 EFCAB14O75071 495 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 CLSTN1O94985 981 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 PLEKP08567 350 aaPredicted RBP11.67□□□□□ -0.54
CSDC2-202ENST00000460790 WEE2P0C1S8 567 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 EIF4A3P38919 411 aaKnown RBP11.67□□□□□ -0.54
CSDC2-202ENST00000460790 USP8P40818 1118 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 CLCNKBP51801 687 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 BPIFB4P59827 614 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 LILRA4P59901 499 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 YWHAEP62258 255 aaKnown RBP11.67□□□□□ -0.54
CSDC2-202ENST00000460790 DSC1Q08554 894 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 PPIGQ13427 754 aaKnown RBP eCLIP11.67□□□□□ -0.54
CSDC2-202ENST00000460790 MTF1Q14872 753 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 UPP1Q16831 310 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 RAD9BQ6WBX8 426 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 GPIHBP1Q8IV16 184 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 BADQ92934 168 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 CCDC42Q96M95 316 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 UROC1Q96N76 676 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 HTATIP2Q9BUP3 242 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 SDCBP2Q9H190 292 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 CISHQ9NSE2 258 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 TBC1D13Q9NVG8 400 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 PCDHB4Q9Y5E5 795 aa11.67□□□□□ -0.54
CSDC2-202ENST00000460790 CASTOR2A6NHX0 329 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 PODXLO00592 558 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 SPTLC1O15269 473 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 BAIAP3O94812 1187 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 DDHD2O94830 711 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 FAM163BP0C2L3 166 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 ACRP10323 421 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 KRT5P13647 590 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 PAX3P23760 479 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 CYLC1P35663 651 aaPredicted RBP11.66□□□□□ -0.54
CSDC2-202ENST00000460790 ZNF132P52740 706 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 CDH8P55286 799 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 TNNC1P63316 161 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 PTK2Q05397 1052 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 SV2CQ496J9 727 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 TDRD12Q587J7 1177 aaKnown RBP11.66□□□□□ -0.54
CSDC2-202ENST00000460790 DCLRE1AQ6PJP8 1040 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 TMEM270Q6UE05 265 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 C16orf59Q7L2K0 433 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 DPH6Q7L8W6 267 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 ZNF571Q7Z3V5 609 aaPredicted RBP11.66□□□□□ -0.54
CSDC2-202ENST00000460790 LIMS2Q7Z4I7 341 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 ZSCAN30Q86W11 494 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 ZNF280BQ86YH2 543 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 COLGALT2Q8IYK4 626 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 C7orf61Q8IZ16 206 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 ABI1Q8IZP0 508 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 TTC39CQ8N584 583 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 KIAA1524Q8TCG1 905 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 TOP1MTQ969P6 601 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 MMS19Q96T76 1030 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 SYT11Q9BT88 431 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 SMYD3Q9H7B4 428 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 CACNG4Q9UBN1 327 aa11.66□□□□□ -0.54
CSDC2-202ENST00000460790 SNX9Q9Y5X1 595 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms