RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 CNR2P34972 360 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 SLC1A4P43007 532 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 RARSP54136 660 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 GYS2P54840 703 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 G3BP1Q13283 466 aaKnown RBP eCLIP4.67□□□□□ -1.661e-11■■■□□ 15.6
ECHDC1-211ENST00000460558 SNW1Q13573 536 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 TCEA2Q15560 299 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 MLF2Q15773 248 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 FBXO47Q5MNV8 452 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 DAB2IPQ5VWQ8 1189 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 C15orf39Q6ZRI6 1047 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 CEP68Q76N32 757 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 RSPH3Q86UC2 560 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 LINC01599Q8WXQ3 324 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 ISL2Q96A47 359 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 CLDN23Q96B33 292 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 CCDC74BQ96LY2 380 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 SLC6A18Q96N87 628 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 MYADMQ96S97 322 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 DBNDD2Q9BQY9 259 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 RNPEPQ9H4A4 650 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 RAD18Q9NS91 495 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 PFDN2Q9UHV9 154 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 NOP58Q9Y2X3 529 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 MTF2Q9Y483 593 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 PCDHB7Q9Y5E2 793 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 LAMA1P25391 3075 aa4.67□□□□□ -1.66
ECHDC1-211ENST00000460558 ABCA7Q8IZY2 2146 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 CCDC163A0A0D9SF12 145 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 F8W735 103 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 GNB5O14775 395 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 CBFA2T2O43439 604 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 HYAL3O43820 417 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 DNAJC6O75061 913 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 N4BP1O75113 896 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 TTLL1O95922 423 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 FAM153BP0C7A2 387 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 TDGF1P13385 188 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 EPCAMP16422 314 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 IBSPP21815 317 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 CD52P31358 61 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 CCR3P51677 355 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 SNAP25P60880 206 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 RPS6P62753 249 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 SNRPNP63162 240 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 ATP8B2P98198 1209 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 PFKPQ01813 784 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 SRSF1Q07955 248 aaKnown RBP eCLIP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 MTAPQ13126 283 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 HTR4Q13639 388 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 GIT2Q14161 759 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 GNPTABQ3T906 1256 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 ANKRD39Q53RE8 183 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 SLC9C2Q5TAH2 1124 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 PRAMEF13Q5VWM6 474 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 ANKRD34AQ69YU3 496 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 TAF2Q6P1X5 1199 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 KCNT2Q6UVM3 1135 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 ACAD11Q709F0 780 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 FILIP1Q7Z7B0 1213 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 RTN4RL1Q86UN2 441 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 LCORLQ8N3X6 602 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 DNAJB8Q8NHS0 232 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 KISS1RQ969F8 398 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 SPATA33Q96N06 139 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 ZNF558Q96NG5 402 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 KIF2CQ99661 725 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 C16orf70Q9BSU1 422 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 IER2Q9BTL4 223 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 KLHL25Q9H0H3 589 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 SLKQ9H2G2 1235 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 ARRDC1-AS1Q9H2J1 176 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 MKNK2Q9HBH9 465 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 PCDH12Q9NPG4 1184 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 ARHGEF4Q9NR80 690 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 FAM105AQ9NUU6 356 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 TYW1Q9NV66 732 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 SETD4Q9NVD3 440 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 SPG21Q9NZD8 308 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 PNMA2Q9UL42 364 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 PLAAQ9Y263 795 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 MRPS17Q9Y2R5 130 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 COL4A3BPQ9Y5P4 624 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 ACTL7BQ9Y614 415 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 FPGT-TNNI3KV9GXZ4 949 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 CLUHO75153 1309 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 CCDC171Q6TFL3 1326 aa4.66□□□□□ -1.66
ECHDC1-211ENST00000460558 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 A0A1W2PQU0 124 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 ANKRD34BA5PLL1 514 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 CAPN8A6NHC0 703 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 SPDYE3A6NKU9 549 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 C9IYK1 514 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 ANHXE9PGG2 379 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 SHOXO15266 292 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 RFPL3O75679 317 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 LRIG2O94898 1065 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 CXCL14O95715 111 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms