RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 EFHBQ8N7U6 833 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 PABPC5Q96DU9 382 aaKnown RBP10.54□□□□□ -0.72
EPB41-208ENST00000460378 ELOVL4Q9GZR5 314 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 CYTH3O43739 400 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 SLC37A4O43826 429 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 CHPFQ8IZ52 775 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 PARD3BQ8TEW8 1205 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 AUTS2Q8WXX7 1259 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 TMEM134Q9H6X4 195 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 SMPD4Q9NXE4 827 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 BARX2Q9UMQ3 279 aaPredicted RBP10.54□□□□□ -0.72
EPB41-208ENST00000460378 PPP6R2O75170 966 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 NMT1P30419 496 aaKnown RBP10.54□□□□□ -0.72
EPB41-208ENST00000460378 RGS19P49795 217 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 COG7P83436 770 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 FAM160A1Q05DH4 1040 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 TOB2Q14106 344 aaPredicted RBP10.54□□□□□ -0.72
EPB41-208ENST00000460378 KRT81Q14533 505 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 HADHQ16836 314 aaKnown RBP10.54□□□□□ -0.72
EPB41-208ENST00000460378 FNDC3BQ53EP0 1204 aaKnown RBP10.54□□□□□ -0.72
EPB41-208ENST00000460378 C11orf74Q86VG3 221 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 SIAH1Q8IUQ4 282 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 RABGGTAQ92696 567 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 TTC25Q96NG3 672 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 ARFGEF1Q9Y6D6 1849 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 TRIOBPQ9H2D6 2365 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 H0Y626 953 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 H3BNC9 293 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 FKBP3Q00688 224 aaKnown RBP10.54□□□□□ -0.72
EPB41-208ENST00000460378 RWDD4Q6NW29 188 aaKnown RBP10.54□□□□□ -0.72
EPB41-208ENST00000460378 CCDC62Q6P9F0 684 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 GABPB2Q8TAK5 448 aaPredicted RBP10.54□□□□□ -0.72
EPB41-208ENST00000460378 PI4K2AQ9BTU6 479 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 ABCG4Q9H172 646 aa10.54□□□□□ -0.72
EPB41-208ENST00000460378 C8orf33Q9H7E9 229 aaPredicted RBP10.54□□□□□ -0.72
EPB41-208ENST00000460378 SLC2A3P11169 496 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 MYOGP15173 224 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 CA4P22748 312 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 TWF1Q12792 350 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 TTC8Q8TAM2 541 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 MRPL42Q9Y6G3 142 aaKnown RBP10.53□□□□□ -0.72
EPB41-208ENST00000460378 MAGEC1O60732 1142 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 CXCL8P10145 99 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 EDNRBP24530 442 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 CYP26C1Q6V0L0 522 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 ZSCAN30Q86W11 494 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 SPIRE2Q8WWL2 714 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 NELFBQ8WX92 580 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 SELENOOQ9BVL4 669 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 NIFKQ9BYG3 293 aaKnown RBP10.53□□□□□ -0.72
EPB41-208ENST00000460378 DEC1Q9P2X7 70 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 SORCS3Q9UPU3 1222 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.53□□□□□ -0.72
EPB41-208ENST00000460378 MAFBQ9Y5Q3 323 aaPredicted RBP10.53□□□□□ -0.72
EPB41-208ENST00000460378 COL5A3P25940 1745 aaPredicted RBP10.53□□□□□ -0.72
EPB41-208ENST00000460378 PVALEFA0A1B0GWK0 134 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 NSFP46459 744 aaKnown RBP10.53□□□□□ -0.72
EPB41-208ENST00000460378 UBE2HP62256 183 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 PLCB3Q01970 1234 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 KCNH2Q12809 1159 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 TMCO2Q7Z6W1 182 aaPredicted RBP10.53□□□□□ -0.72
EPB41-208ENST00000460378 EFCAB13Q8IY85 973 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 BHMTQ93088 406 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 CGRRF1Q99675 332 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 AASDHPPTQ9NRN7 309 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 AGPAT5Q9NUQ2 364 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 M0QYV0 167 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 DAB2P98082 770 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 TDGQ13569 410 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 CLIC6Q96NY7 704 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 MUC3BQ9H195 1237 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 GDPD2Q9HCC8 539 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 PLAGL2Q9UPG8 496 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 DLG5Q8TDM6 1919 aa10.53□□□□□ -0.72
EPB41-208ENST00000460378 ARL5CA6NH57 179 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 C22orf31O95567 290 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 GRM5P41594 1212 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 ITGB3BPQ13352 177 aaPredicted RBP10.52□□□□□ -0.72
EPB41-208ENST00000460378 NCOA4Q13772 614 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 PRR23CQ6ZRP0 262 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 CHSY1Q86X52 802 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 CCDC50Q8IVM0 306 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 SIX5Q8N196 739 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 ATP6V0D2Q8N8Y2 350 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 OLA1Q9NTK5 396 aaKnown RBP10.52□□□□□ -0.72
EPB41-208ENST00000460378 HSPBP1Q9NZL4 362 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 LZTS1Q9Y250 596 aa10.52□□□□□ -0.72
EPB41-208ENST00000460378 DTNBO60941 627 aa10.52□□□□□ -0.73
EPB41-208ENST00000460378 VAMP7P51809 220 aa10.52□□□□□ -0.73
EPB41-208ENST00000460378 CSTF1Q05048 431 aaKnown RBP10.52□□□□□ -0.73
EPB41-208ENST00000460378 KRT39Q6A163 491 aa10.52□□□□□ -0.73
EPB41-208ENST00000460378 C12orf76Q8N812 135 aaPredicted RBP10.52□□□□□ -0.73
EPB41-208ENST00000460378 REEP2Q9BRK0 252 aa10.52□□□□□ -0.73
EPB41-208ENST00000460378 DUS2Q9NX74 493 aaKnown RBP10.52□□□□□ -0.73
EPB41-208ENST00000460378 FOXD2O60548 495 aaPredicted RBP10.52□□□□□ -0.73
EPB41-208ENST00000460378 PSMD10O75832 226 aa10.52□□□□□ -0.73
EPB41-208ENST00000460378 ZNF202O95125 648 aa10.52□□□□□ -0.73
EPB41-208ENST00000460378 PBX3P40426 434 aa10.52□□□□□ -0.73
EPB41-208ENST00000460378 UBXN1Q04323 297 aa10.52□□□□□ -0.73
EPB41-208ENST00000460378 COASYQ13057 564 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms