RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 TNNC2P02585 160 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 TMEM191BP0C7N4 346 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 CCDC192P0DO97 292 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 DLATP10515 647 aaKnown RBP10.72□□□□□ -0.69
VPS45-204ENST00000460366 TNNI1P19237 187 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 PBX3P40426 434 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 PNPLA4P41247 253 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 AARSP49588 968 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS45-204ENST00000460366 MARSP56192 900 aaKnown RBP10.72□□□□□ -0.69
VPS45-204ENST00000460366 STX17P56962 302 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 RBP5P82980 135 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 TYRO3Q06418 890 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 BFSP1Q12934 665 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 PUS10Q3MIT2 529 aaKnown RBP10.72□□□□□ -0.69
VPS45-204ENST00000460366 FUT10Q6P4F1 479 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 TRAPPC11Q7Z392 1133 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 TMEM173Q86WV6 379 aaPredicted RBP10.72□□□□□ -0.69
VPS45-204ENST00000460366 LRRC52Q8N7C0 313 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 C1orf127Q8N9H9 656 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 CXorf38Q8TB03 319 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 PLEKHO2Q8TD55 490 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 BCL7CQ8WUZ0 217 aaPredicted RBP10.72□□□□□ -0.69
VPS45-204ENST00000460366 POF1BQ8WVV4 589 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 MED15Q96RN5 788 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 SRRTQ9BXP5 876 aaKnown RBP10.72□□□□□ -0.69
VPS45-204ENST00000460366 PRDM12Q9H4Q4 367 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 GOLGA2P5Q9HBQ8 144 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 ALG13Q9NP73 1137 aaKnown RBP10.72□□□□□ -0.69
VPS45-204ENST00000460366 NGRNQ9NPE2 291 aaKnown RBP10.72□□□□□ -0.69
VPS45-204ENST00000460366 ARMCX3Q9UH62 379 aaPredicted RBP10.72□□□□□ -0.69
VPS45-204ENST00000460366 SSX2IPQ9Y2D8 614 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 SF3B1O75533 1304 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS45-204ENST00000460366 TRIP11Q15643 1979 aa10.72□□□□□ -0.69
VPS45-204ENST00000460366 ARHGEF37A1IGU5 675 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 LRRIQ3A6PVS8 624 aaPredicted RBP10.71□□□□□ -0.69
VPS45-204ENST00000460366 TDRD15B5MCY1 1934 aaKnown RBP10.71□□□□□ -0.69
VPS45-204ENST00000460366 SYN3O14994 580 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 PMM2O15305 246 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 CAVIN2O95810 425 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 C4BPAP04003 597 aaKnown RBP10.71□□□□□ -0.69
VPS45-204ENST00000460366 SOD2P04179 222 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 CTSAP10619 480 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 PRKCSHP14314 528 aaPredicted RBP10.71□□□□□ -0.69
VPS45-204ENST00000460366 GUCY2FP51841 1108 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 LILRA4P59901 499 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 CAMK1Q14012 370 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 C1orf220Q5T0J3 134 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 PDXDC1Q6P996 788 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 VPS52Q8N1B4 723 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 OR5B17Q8NGF7 314 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 GDPD5Q8WTR4 605 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 EEF2KMTQ96G04 330 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 SUSD3Q96L08 255 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 ZNF560Q96MR9 790 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 GAS2L1Q99501 681 aaPredicted RBP10.71□□□□□ -0.69
VPS45-204ENST00000460366 POP1Q99575 1024 aaKnown RBP10.71□□□□□ -0.69
VPS45-204ENST00000460366 CDX2Q99626 313 aaPredicted RBP10.71□□□□□ -0.69
VPS45-204ENST00000460366 FUCA2Q9BTY2 467 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 HERC2P3Q9BVR0 1158 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 GPR62Q9BZJ7 368 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 MTMR12Q9C0I1 747 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 NAT10Q9H0A0 1025 aaKnown RBP10.71□□□□□ -0.69
VPS45-204ENST00000460366 THAP9Q9H5L6 903 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 TLR9Q9NR96 1032 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 CHST7Q9NS84 486 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 CACNG4Q9UBN1 327 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 SIX4Q9UIU6 781 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 R3HCC1Q9Y3T6 440 aaKnown RBP10.71□□□□□ -0.69
VPS45-204ENST00000460366 IRAK3Q9Y616 596 aa10.71□□□□□ -0.69
VPS45-204ENST00000460366 PTPRJQ12913 1337 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 M0QZQ0 153 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 RFXAPO00287 272 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 LILRB3O75022 631 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 STAU1O95793 577 aaKnown RBP10.7□□□□□ -0.7
VPS45-204ENST00000460366 FAM163BP0C2L3 166 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 FGFR3P22607 806 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 DNAJB1P25685 340 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 ATICP31939 592 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 TAF6P49848 677 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 DLG4P78352 724 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 DSG1Q02413 1049 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 ADGRE1Q14246 886 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 SMC1AQ14683 1233 aaKnown RBP10.7□□□□□ -0.7
VPS45-204ENST00000460366 TPD52L1Q16890 204 aaPredicted RBP10.7□□□□□ -0.7
VPS45-204ENST00000460366 USP41Q3LFD5 358 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 ZSCAN23Q3MJ62 389 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 ZACNQ401N2 412 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 CCDC40Q4G0X9 1142 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 KIAA0319Q5VV43 1072 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.7□□□□□ -0.7
VPS45-204ENST00000460366 C15orf39Q6ZRI6 1047 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 SV2AQ7L0J3 742 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 Q7L0L9 218 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 FAM114A1Q8IWE2 563 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 MRPL43Q8N983 215 aaKnown RBP10.7□□□□□ -0.7
VPS45-204ENST00000460366 C3orf58Q8NDZ4 430 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 RABGGTAQ92696 567 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 FAM161BQ96MY7 647 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 GUCD1Q96NT3 240 aa10.7□□□□□ -0.7
VPS45-204ENST00000460366 BPIFA3Q9BQP9 254 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms