RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 SLC35B4Q969S0 331 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 EPAS1Q99814 870 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.09□□□□□ -0.63
HERC4-207ENST00000460168 HAUS4Q9H6D7 363 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 PTPRHQ9HD43 1115 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 XPNPEP3Q9NQH7 507 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 RAB20Q9NX57 234 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 HDAC6Q9UBN7 1215 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 TNFSF13BQ9Y275 285 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 COQ4Q9Y3A0 265 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 REXO2Q9Y3B8 237 aaKnown RBP11.09□□□□□ -0.63
HERC4-207ENST00000460168 BZW2Q9Y6E2 419 aaKnown RBP11.09□□□□□ -0.63
HERC4-207ENST00000460168 TRIM64CA6NLI5 447 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 BOLA2-SMG1P6H3BVE0 249 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 GPR25O00155 361 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 ABLIM1O14639 778 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 TREHO43280 583 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 FAM189A1O60320 539 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 GFPT2O94808 682 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 HMGCRP04035 888 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 CCND3P30281 292 aaPredicted RBP11.09□□□□□ -0.63
HERC4-207ENST00000460168 SOX5P35711 763 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 WNT7BP56706 349 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 GNG11P61952 73 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 CLDN10P78369 228 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 GFPT1Q06210 699 aaPredicted RBP11.09□□□□□ -0.63
HERC4-207ENST00000460168 ADCY1Q08828 1119 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 NAA30Q147X3 362 aaPredicted RBP11.09□□□□□ -0.63
HERC4-207ENST00000460168 EEF1DP3Q658K8 133 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 CXCL17Q6UXB2 119 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 SRGAP1Q7Z6B7 1085 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 BRSK2Q8IWQ3 736 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 DNAJB3Q8WWF6 145 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 CPB2Q96IY4 423 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 FAM84AQ96KN4 292 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 MTG1Q9BT17 334 aaPredicted RBP11.09□□□□□ -0.63
HERC4-207ENST00000460168 IFIH1Q9BYX4 1025 aaKnown RBP11.09□□□□□ -0.63
HERC4-207ENST00000460168 DNAI1Q9UI46 699 aa11.09□□□□□ -0.63
HERC4-207ENST00000460168 EIF3FO00303 357 aaPredicted RBP11.08□□□□□ -0.64
HERC4-207ENST00000460168 KRT86O43790 486 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 EVI5O60447 810 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 ZNF189O75820 626 aaPredicted RBP11.08□□□□□ -0.64
HERC4-207ENST00000460168 FESP07332 822 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 FOSL1P15407 271 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 FERP16591 822 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 ARF4P18085 180 aaPredicted RBP11.08□□□□□ -0.64
HERC4-207ENST00000460168 ENPP1P22413 925 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 PIK3CAP42336 1068 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 ADAM17P78536 824 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 ZNF200P98182 395 aaPredicted RBP11.08□□□□□ -0.64
HERC4-207ENST00000460168 PTK2Q05397 1052 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 HIC1Q14526 733 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 AMHR2Q16671 573 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 RUFY4Q6ZNE9 571 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 IRF2BP2Q7Z5L9 587 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 ARHGEF19Q8IW93 802 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 SMYD1Q8NB12 490 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 ZNF516Q92618 1163 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 SEMA4DQ92854 862 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 NT5C1BQ96P26 610 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 OSMRQ99650 979 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 CGRRF1Q99675 332 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 GCOM2Q9BZD3 368 aaPredicted RBP11.08□□□□□ -0.64
HERC4-207ENST00000460168 CDT1Q9H211 546 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 ADAMTS1Q9UHI8 967 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 CPSF3Q9UKF6 684 aaKnown RBP11.08□□□□□ -0.64
HERC4-207ENST00000460168 PTPRJQ12913 1337 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 ZNF263O14978 683 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 ASTE1Q2TB18 679 aaPredicted RBP11.08□□□□□ -0.64
HERC4-207ENST00000460168 ZACNQ401N2 412 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 CCDC122Q5T0U0 273 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 TDRD10Q5VZ19 366 aaKnown RBP11.08□□□□□ -0.64
HERC4-207ENST00000460168 C11orf96Q7Z7L8 435 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 VPS36Q86VN1 386 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 CCDC114Q96M63 670 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 ADPGKQ9BRR6 497 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 UPF3AQ9H1J1 476 aaKnown RBP11.08□□□□□ -0.64
HERC4-207ENST00000460168 PDZD7Q9H5P4 517 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 GUCA1BQ9UMX6 200 aa11.08□□□□□ -0.64
HERC4-207ENST00000460168 TRIP12Q14669 1992 aaPredicted RBP11.08□□□□□ -0.64
HERC4-207ENST00000460168 TSPAN1O60635 241 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 PHACTR2O75167 634 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 GPR32O75388 356 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 GNRH1P01148 92 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 C4BPAP04003 597 aaKnown RBP11.07□□□□□ -0.64
HERC4-207ENST00000460168 FGFR4P22455 802 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 CA8P35219 290 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 PRKCIP41743 596 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 VAV2P52735 878 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 MFAP3P55082 362 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 KIF5AQ12840 1032 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 SURF1Q15526 300 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 SLC18A3Q16572 532 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 FAM47CQ5HY64 1035 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 WDR44Q5JSH3 913 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 C15orf39Q6ZRI6 1047 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 CATSPER4Q7RTX7 472 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 WDR49Q8IV35 697 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 MAB21L3Q8N8X9 362 aa11.07□□□□□ -0.64
HERC4-207ENST00000460168 JAKMIP2Q96AA8 810 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms