RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 GLIS1Q8NBF1 620 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 MCEEQ96PE7 176 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 OSBPL8Q9BZF1 889 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 KIAA1586Q9HCI6 787 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 HOXC10Q9NYD6 342 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 BTBD7Q9P203 1132 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 AFG3L2Q9Y4W6 797 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 RTP1P59025 263 aa19.27■□□□□ 0.67
HPS3-202ENST00000460120 BPIFB4P59827 614 aa19.27■□□□□ 0.67
HPS3-202ENST00000460120 MTM1Q13496 603 aa19.27■□□□□ 0.67
HPS3-202ENST00000460120 CCDC13Q8IYE1 715 aa19.27■□□□□ 0.67
HPS3-202ENST00000460120 THNSL1Q8IYQ7 743 aa19.27■□□□□ 0.67
HPS3-202ENST00000460120 ATXN2LQ8WWM7 1075 aaKnown RBP19.27■□□□□ 0.67
HPS3-202ENST00000460120 ZNF112Q9UJU3 913 aa19.27■□□□□ 0.67
HPS3-202ENST00000460120 ADAMTS5Q9UNA0 930 aa19.27■□□□□ 0.67
HPS3-202ENST00000460120 A0A0B4J269 797 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 H0YCG3 227 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 POTEJP0CG39 1038 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 TCF7P36402 384 aaPredicted RBP19.26■□□□□ 0.67
HPS3-202ENST00000460120 OAZ1P54368 228 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 TGFB2P61812 414 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 WDR78Q5VTH9 848 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 TXNRD3NBQ6F5E7 133 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 GADL1Q6ZQY3 521 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 EXOC3L1Q86VI1 746 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 RHOT1Q8IXI2 618 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.26■□□□□ 0.67
HPS3-202ENST00000460120 CGRRF1Q99675 332 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 C10orf88Q9H8K7 445 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 AVENQ9NQS1 362 aaPredicted RBP19.26■□□□□ 0.67
HPS3-202ENST00000460120 C19orf81C9J6K1 198 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 F8VP50 259 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 DNM1LO00429 736 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 CSDE1O75534 798 aaKnown RBP19.26■□□□□ 0.67
HPS3-202ENST00000460120 AGTP01019 485 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 IBSPP21815 317 aaPredicted RBP19.26■□□□□ 0.67
HPS3-202ENST00000460120 GBP1P32455 592 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 ARL2P36404 184 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 ALDH5A1P51649 535 aaPredicted RBP19.26■□□□□ 0.67
HPS3-202ENST00000460120 STAT5BP51692 787 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 C6orf89Q6UWU4 347 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 SPATS2Q86XZ4 545 aaKnown RBP19.26■□□□□ 0.67
HPS3-202ENST00000460120 ZNF606Q8WXB4 792 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 ARHGEF2Q92974 986 aaKnown RBP19.26■□□□□ 0.67
HPS3-202ENST00000460120 IMPG2Q9BZV3 1241 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 GINM1Q9NU53 330 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 NXF1Q9UBU9 619 aaKnown RBP19.26■□□□□ 0.67
HPS3-202ENST00000460120 CNTNAP2Q9UHC6 1331 aa19.26■□□□□ 0.67
HPS3-202ENST00000460120 GOLGA8SH3BPF8 625 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 HNRNPH1P31943 449 aaKnown RBP19.25■□□□□ 0.67
HPS3-202ENST00000460120 DYNLT1P63172 113 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 IRX3P78415 501 aaPredicted RBP19.25■□□□□ 0.67
HPS3-202ENST00000460120 SPDYCQ5MJ68 293 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 IZUMO3Q5VZ72 239 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 TRIM11Q96F44 468 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 CPP00450 1065 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 KRT1P04264 644 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 PAEPP09466 180 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 MYBL1P10243 752 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 IVDP26440 423 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 KCNV1Q6PIU1 500 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 RNF149Q8NC42 400 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 ATL2Q8NHH9 583 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 RUNDC3BQ96NL0 473 aa19.25■□□□□ 0.67
HPS3-202ENST00000460120 FHDC1Q9C0D6 1143 aaPredicted RBP19.25■□□□□ 0.67
HPS3-202ENST00000460120 FARP2O94887 1054 aaPredicted RBP19.24■□□□□ 0.67
HPS3-202ENST00000460120 SLC1A1P43005 524 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 RAP1GAPP47736 663 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 HIRAP54198 1017 aaPredicted RBP19.24■□□□□ 0.67
HPS3-202ENST00000460120 ZKSCAN8Q15776 578 aaPredicted RBP19.24■□□□□ 0.67
HPS3-202ENST00000460120 P3H1Q32P28 736 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 TMEM63BQ5T3F8 832 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 SLFN12LQ6IEE8 588 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 DCUN1D2Q6PH85 259 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 ZNF677Q86XU0 584 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 CEP120Q8N960 986 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 NLRP4Q96MN2 994 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 WHRNQ9P202 907 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 IVNS1ABPQ9Y6Y0 642 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 PHIPQ8WWQ0 1821 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 GH1P01241 217 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 KRT19P08727 400 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 ITIH2P19823 946 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 CLDN10P78369 228 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 PTK6Q13882 451 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 VGLL4Q14135 290 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 DPH6Q7L8W6 267 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 CYP4X1Q8N118 509 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 FEZF2Q8TBJ5 459 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 C12orf42Q96LP6 360 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 MRPL47Q9HD33 250 aaKnown RBP19.24■□□□□ 0.67
HPS3-202ENST00000460120 SAE1Q9UBE0 346 aaPredicted RBP19.24■□□□□ 0.67
HPS3-202ENST00000460120 TJP2Q9UDY2 1190 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 ZNF148Q9UQR1 794 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 TMEM120BA0PK00 339 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 CETPP11597 493 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 PLCB3Q01970 1234 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 SMTNL2Q2TAL5 461 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 MFSD7Q6UXD7 560 aa19.24■□□□□ 0.67
HPS3-202ENST00000460120 RHPN2Q8IUC4 686 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms