RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 NOGQ13253 232 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 VGLL4Q14135 290 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 SMYD4Q8IYR2 804 aaPredicted RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 PPP2R3CQ969Q6 453 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 MIEF2Q96C03 454 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 CCDC28BQ9BUN5 200 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 FRMD8Q9BZ67 464 aaPredicted RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 KIAA1586Q9HCI6 787 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 C15orf41Q9Y2V0 281 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 DTNAQ9Y4J8 743 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 KANSL1LA0AUZ9 987 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 KRT14P02533 472 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 KRT7P08729 469 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 SRGAP2CP0DJJ0 459 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 SCP2P22307 547 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 ZC3H12BQ5HYM0 836 aaKnown RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 ZIM3Q96PE6 472 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 DKK3Q9UBP4 350 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.25□□□□□ -0.77
UFD1-205ENST00000459854 CHD4Q14839 1912 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 AK9Q5TCS8 1911 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 ASTN2O75129 1339 aaPredicted RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 ATRNL1Q5VV63 1379 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 TMEM191CA6NGB0 347 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 PHF20L1A8MW92 1017 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 HIRAP54198 1017 aaPredicted RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 USH1GQ495M9 461 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 SGMS1Q86VZ5 419 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 RBBP8NLQ8NC74 664 aaPredicted RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 ANKRD36BP1Q96IX9 119 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 CHAMP1Q96JM3 812 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 ADPGKQ9BRR6 497 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 DDX47Q9H0S4 455 aaKnown RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 NRDE2Q9H7Z3 1164 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 MLXIPQ9HAP2 919 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 L1RE1Q9UN81 338 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 PPME1Q9Y570 386 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 MAP3K13O43283 966 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 NMT2O60551 498 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 YWHAHQ04917 246 aaPredicted RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 LRRC8EQ6NSJ5 796 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 RSPH1Q8WYR4 309 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 MAGED4Q96JG8 741 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 KIAA1683Q9H0B3 1180 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 TMX2Q9Y320 296 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 TTC26A0AVF1 554 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 WDR64B1ANS9 1081 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 PRR23D1E9PI22 279 aaPredicted RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 NDUFB10O96000 172 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 EGFRP00533 1210 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 PRR23D2P0DMB1 279 aaPredicted RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 TFDP1Q14186 410 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 TMTC4Q5T4D3 741 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 RHOT1Q8IXI2 618 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 GUF1Q8N442 669 aaKnown RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 ZNF384Q8TF68 577 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 RNPC3Q96LT9 517 aaKnown RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 MAGEB5Q9BZ81 275 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 KLHL25Q9H0H3 589 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 IP6K2Q9UHH9 426 aa10.25□□□□□ -0.77
UFD1-205ENST00000459854 COL11A2P13942 1736 aaPredicted RBP10.25□□□□□ -0.77
UFD1-205ENST00000459854 DYTNA2CJ06 578 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 HOXD10P28358 340 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 TTKP33981 857 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 RGS2P41220 211 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 GRM4Q14833 912 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 TRMT5Q32P41 509 aaKnown RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 KBTBD12Q3ZCT8 623 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 XKR9Q5GH70 373 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 MMADHCQ9H3L0 296 aaPredicted RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 LY9Q9HBG7 655 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 ATXN2Q99700 1313 aaKnown RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 WBP4O75554 376 aaKnown RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 CLPTM1O96005 669 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 UBTFL6P0CB48 400 aaPredicted RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 PTPRAP18433 802 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 TRIP13Q15645 432 aaPredicted RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 CEP78Q5JTW2 689 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 C4orf22Q6V702 233 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 RIN3Q8TB24 985 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 SYN2Q92777 582 aaPredicted RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 APBB2Q92870 758 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 CAVIN3Q969G5 261 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 MAGEB18Q96M61 343 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 PLCG1P19174 1290 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 IZUMO3Q5VZ72 239 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 TATDN1Q6P1N9 297 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 CDKL3Q8IVW4 592 aaPredicted RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 TTC39CQ8N584 583 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 TTC8Q8TAM2 541 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 SNRNP27Q8WVK2 155 aaKnown RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 OLFM1Q99784 485 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 NRBP2Q9NSY0 501 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 RPL26L1Q9UNX3 145 aaKnown RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 PCDHA1Q9Y5I3 950 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 ENO1P06733 434 aaKnown RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 DLATP10515 647 aaKnown RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 DCTN2Q13561 401 aaKnown RBP10.24□□□□□ -0.77
UFD1-205ENST00000459854 LRRC14Q15048 493 aa10.24□□□□□ -0.77
UFD1-205ENST00000459854 STOX1Q6ZVD7 989 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms