RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ARHGEF37A1IGU5 675 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 PRRG1O14668 218 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 PPEF2O14830 753 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 EIF3DO15371 548 aaKnown RBP eCLIP17.45■□□□□ 0.38
COL7A1-203ENST00000459756 EXTL3O43909 919 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 TYMPP19971 482 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 CMA1P23946 247 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 FAM26FQ5R3K3 315 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 ARMCX5Q6P1M9 558 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 UNC13DQ70J99 1090 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 GET4Q7L5D6 327 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-203ENST00000459756 EPM2AIP1Q7L775 607 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-203ENST00000459756 BRSK2Q8IWQ3 736 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 CEP57L1Q8IYX8 460 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 SAAL1Q96ER3 474 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 ASIC4Q96FT7 647 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 MYADMQ96S97 322 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 CBWD1Q9BRT8 395 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 KCNK12Q9HB15 430 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 DPP3Q9NY33 737 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 POLIQ9UNA4 740 aa17.45■□□□□ 0.38
COL7A1-203ENST00000459756 ZFP37Q9Y6Q3 630 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-203ENST00000459756 PVALEFA0A1B0GWK0 134 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 SLFN14P0C7P3 912 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 ODC1P11926 461 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 EHHADHQ08426 723 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 TDGQ13569 410 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 OVOS1Q6IE37 1185 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 EFCAB13Q8IY85 973 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 GLIS3Q8NEA6 775 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 ZNF507Q8TCN5 953 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 NXPE3Q969Y0 559 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 SENP8Q96LD8 212 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 CYP4F11Q9HBI6 524 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 RBAKQ9NYW8 714 aaPredicted RBP17.44■□□□□ 0.38
COL7A1-203ENST00000459756 AFF4Q9UHB7 1163 aaKnown RBP17.44■□□□□ 0.38
COL7A1-203ENST00000459756 USP25Q9UHP3 1055 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 TIMM13Q9Y5L4 95 aaPredicted RBP17.44■□□□□ 0.38
COL7A1-203ENST00000459756 DOCK8Q8NF50 2099 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 UBE4BO95155 1302 aa17.44■□□□□ 0.38
COL7A1-203ENST00000459756 OR6C75A6NL08 312 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 SPTLC1O15269 473 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 LRG1P02750 347 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 LAMP2P13473 410 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 CPB1P15086 417 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 HOXD13P35453 343 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 AFMP43652 599 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 NTHL1P78549 312 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 GPD1LQ8N335 351 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 FBXL6Q8N531 539 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 ZSWIM2Q8NEG5 633 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 CACTINQ8WUQ7 758 aaKnown RBP17.43■□□□□ 0.38
COL7A1-203ENST00000459756 SCAND2PQ9GZW5 306 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-203ENST00000459756 BLZF1Q9H2G9 400 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 PCIF1Q9H4Z3 704 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 DSEQ9UL01 958 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 DOCK6Q96HP0 2047 aa17.43■□□□□ 0.38
COL7A1-203ENST00000459756 GOLGA8IPA6NC78 632 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 GOLGA8JA6NMD2 632 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 ACTN4O43707 911 aaKnown RBP17.42■□□□□ 0.38
COL7A1-203ENST00000459756 PFKFB1P16118 471 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 CASP1P29466 404 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 TAF6P49848 677 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 TFAMQ00059 246 aaKnown RBP17.42■□□□□ 0.38
COL7A1-203ENST00000459756 CUL4BQ13620 913 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 MYBPC2Q14324 1141 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 PABPC1LQ4VXU2 614 aaKnown RBP17.42■□□□□ 0.38
COL7A1-203ENST00000459756 SUGP1Q8IWZ8 645 aaKnown RBP17.42■□□□□ 0.38
COL7A1-203ENST00000459756 ZNF560Q96MR9 790 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 SMOC2Q9H3U7 446 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 HCFC1R1Q9NWW0 138 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 DNMT3BQ9UBC3 853 aaKnown RBP17.42■□□□□ 0.38
COL7A1-203ENST00000459756 SERTAD1Q9UHV2 236 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 CDH7Q9ULB5 785 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 INSL5Q9Y5Q6 135 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 SCN1AP35498 2009 aa17.42■□□□□ 0.38
COL7A1-203ENST00000459756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-203ENST00000459756 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 TULP1O00294 542 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-203ENST00000459756 SEC24AO95486 1093 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 CYP11A1P05108 521 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 PTPN2P17706 415 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 PNPLA4P41247 253 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 WNT7BP56706 349 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 SNRPFP62306 86 aaKnown RBP17.41■□□□□ 0.38
COL7A1-203ENST00000459756 ADCY1Q08828 1119 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 GPR17Q13304 367 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 SV2CQ496J9 727 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 RNF19BQ6ZMZ0 732 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 NOC3LQ8WTT2 800 aaKnown RBP17.41■□□□□ 0.38
COL7A1-203ENST00000459756 SCFD1Q8WVM8 642 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 PAGE5Q96GU1 130 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 CHAMP1Q96JM3 812 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 KCNH6Q9H252 994 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 KIAA1586Q9HCI6 787 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 AVENQ9NQS1 362 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-203ENST00000459756 HSPBP1Q9NZL4 362 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 DUSP12Q9UNI6 340 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 HPSEQ9Y251 543 aa17.41■□□□□ 0.38
COL7A1-203ENST00000459756 ZNF318Q5VUA4 2279 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms